RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 VSTM2BA6NLU5 285 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 DLX3O60479 287 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 UGDHO60701 494 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 NSA2O95478 260 aaKnown RBP19.3■□□□□ 0.68
SKA3-205ENST00000465471 TBX6O95947 436 aaPredicted RBP19.3■□□□□ 0.68
SKA3-205ENST00000465471 PROCP04070 461 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 SERPINA6P08185 405 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 ATP5F1P24539 256 aaPredicted RBP19.3■□□□□ 0.68
SKA3-205ENST00000465471 RGS1Q08116 209 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 UGT8Q16880 541 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 PAGE2BQ5JRK9 111 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 BEND6Q5SZJ8 279 aaPredicted RBP19.3■□□□□ 0.68
SKA3-205ENST00000465471 GRHL2Q6ISB3 625 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 PRSS41Q7RTY9 318 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 LAS2Q8IYD9 372 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 C4orf33Q8N1A6 199 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 ZNF483Q8TF39 744 aaPredicted RBP19.3■□□□□ 0.68
SKA3-205ENST00000465471 SPSB2Q99619 263 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 ZBTB26Q9HCK0 441 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 PADI2Q9Y2J8 665 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 MAU2Q9Y6X3 613 aa19.3■□□□□ 0.68
SKA3-205ENST00000465471 A0A0A6YYC8 382 aaPredicted RBP19.29■□□□□ 0.68
SKA3-205ENST00000465471 G3V2L1 256 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 H0YIG0 161 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 I3L1I5 382 aaPredicted RBP19.29■□□□□ 0.68
SKA3-205ENST00000465471 COPEO14579 308 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 OR7A17O14581 309 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 PRPF4O43172 522 aaKnown RBP eCLIP19.29■□□□□ 0.68
SKA3-205ENST00000465471 CTIFO43310 598 aaKnown RBP19.29■□□□□ 0.68
SKA3-205ENST00000465471 PLIN3O60664 434 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 ERLIN1O75477 346 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 CLEC3AO75596 197 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 FURINP09958 794 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 SMIM10L1P0DMW3 83 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 TAC1P20366 129 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 CCT5P48643 541 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 CYP4F2P78329 520 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 NKG7Q16617 165 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 ATP1A1-AS1Q5TC04 95 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 FAM69BQ5VUD6 431 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 MLIPQ5VWP3 458 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 LIPJQ5W064 366 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 ADNP2Q6IQ32 1131 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 PDSS2Q86YH6 399 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 BANPQ8N9N5 519 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 L3MBTL4Q8NA19 623 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 OR9A4Q8NGU2 314 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 OR2Y1Q8NGV0 311 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 ZCCHC10Q8TBK6 192 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 SMIM10Q96HG1 83 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 NSUN5Q96P11 429 aaKnown RBP19.29■□□□□ 0.68
SKA3-205ENST00000465471 ZIM3Q96PE6 472 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 IPPKQ9H8X2 491 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 CTSFQ9UBX1 484 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 GPN3Q9UHW5 284 aaPredicted RBP19.29■□□□□ 0.68
SKA3-205ENST00000465471 GRID1Q9ULK0 1009 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 LHX6Q9UPM6 363 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 TSC22D4Q9Y3Q8 395 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 ANGPTL3Q9Y5C1 460 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 ZFYVE26Q68DK2 2539 aa19.29■□□□□ 0.68
SKA3-205ENST00000465471 C4orf51C9J302 202 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 IL1RNP18510 177 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 FBLP22087 321 aaKnown RBP19.28■□□□□ 0.68
SKA3-205ENST00000465471 HNF4AP41235 474 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 PRKAA2P54646 552 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 HERVK_113P63132 956 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 HERC3Q15034 1050 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 ADPRMQ3LIE5 342 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 CCDC153Q494R4 210 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 SLC22A9Q8IVM8 553 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 TMEM151BQ8IW70 566 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 UTP15Q8TED0 518 aaKnown RBP19.28■□□□□ 0.68
SKA3-205ENST00000465471 UBE2E3Q969T4 207 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 MMABQ96EY8 250 aaPredicted RBP19.28■□□□□ 0.68
SKA3-205ENST00000465471 APOPT1Q96IL0 206 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 TMEM237Q96Q45 408 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 NTMT1Q9BV86 223 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 ERVK-6Q9BXR3 956 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 NXT1Q9UKK6 140 aaKnown RBP19.28■□□□□ 0.68
SKA3-205ENST00000465471 MAP4K5Q9Y4K4 846 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 PCSK5Q92824 1860 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 CHD6Q8TD26 2715 aa19.28■□□□□ 0.68
SKA3-205ENST00000465471 ATMQ13315 3056 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 H0YIV9 168 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 GALR3O60755 368 aaPredicted RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 ITGB2P05107 769 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 SERPIND1P05546 499 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 UMODP07911 640 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 ALOX12P18054 663 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 AVPR1BP47901 424 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 FOXL2P58012 376 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 TRAF3Q13114 568 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 ERV3-1Q14264 604 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 HIST2H2ACQ16777 129 aaPredicted RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 KRT71Q3SY84 523 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 TNFAIP8L3Q5GJ75 292 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 ZNF678Q5SXM1 525 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 HIST2H2AA3Q6FI13 130 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 MED27Q6P2C8 311 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 LRIG3Q6UXM1 1119 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms