RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PRM3Q9NNZ6 103 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 P4HTMQ9NXG6 502 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 CPSF2Q9P2I0 782 aaKnown RBP15.33■□□□□ 0.04
CD28-203ENST00000458610 COPG2Q9UBF2 871 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 CTSFQ9UBX1 484 aa15.33■□□□□ 0.04
CD28-203ENST00000458610 CLEC3AO75596 197 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 STATHP02808 62 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 TUBBP07437 444 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 UMODP07911 640 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 CYC1P08574 325 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 MTHFD2P13995 350 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 CCL11P51671 97 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 EMP2P54851 167 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 KLC1Q07866 573 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 PCDH1Q08174 1060 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 CHIT1Q13231 466 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 ATP1A4Q13733 1029 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 COL9A2Q14055 689 aaPredicted RBP15.32■□□□□ 0.04
CD28-203ENST00000458610 DOC2AQ14183 400 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 TECRLQ5HYJ1 363 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 FAM69BQ5VUD6 431 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 PLD6Q8N2A8 252 aaKnown RBP15.32■□□□□ 0.04
CD28-203ENST00000458610 AMER3Q8N944 861 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 ZCCHC10Q8TBK6 192 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 ABHD17AQ96GS6 310 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 FAR2Q96K12 515 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 MRPL46Q9H2W6 279 aaKnown RBP15.32■□□□□ 0.04
CD28-203ENST00000458610 ATP13A2Q9NQ11 1180 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 ADGRE2Q9UHX3 823 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 C3orf18Q9UK00 162 aa15.32■□□□□ 0.04
CD28-203ENST00000458610 WDFY3Q8IZQ1 3526 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 A0A088AWK7 358 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 AGPSO00116 658 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 KLHL18O94889 574 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 HEXBP07686 556 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 MYBL2P10244 700 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 IL1RNP18510 177 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 TAC1P20366 129 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 ZNF10P21506 573 aaPredicted RBP15.31■□□□□ 0.04
CD28-203ENST00000458610 GCAP28676 217 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 SERPINB1P30740 379 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 TGM3Q08188 693 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 NAA30Q147X3 362 aaPredicted RBP15.31■□□□□ 0.04
CD28-203ENST00000458610 FBXO48Q5FWF7 155 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 VWA2Q5GFL6 755 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 DCAF10Q5QP82 559 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 TCTN3Q6NUS6 607 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 WDR93Q6P2C0 686 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 EMBQ6PCB8 327 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 PPP1R32Q7Z5V6 425 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 AFAP1L2Q8N4X5 818 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 DTWD1Q8N5C7 304 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 TEX9Q8N6V9 391 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 ANKRD53Q8N9V6 530 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 OR51Q1Q8NH59 317 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 METTL21AQ8WXB1 218 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 CCT6BQ92526 530 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 SLC25A23Q9BV35 468 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 SLC6A16Q9GZN6 736 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 SPNS1Q9H2V7 528 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 DCDC2Q9UHG0 476 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 MRPS2Q9Y399 296 aaKnown RBP15.31■□□□□ 0.04
CD28-203ENST00000458610 NAALAD2Q9Y3Q0 740 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 PCDHGB7Q9Y5F8 929 aa15.31■□□□□ 0.04
CD28-203ENST00000458610 PCDHGA9Q9Y5G4 932 aaKnown RBP15.31■□□□□ 0.04
CD28-203ENST00000458610 STX16-NPEPL1H3BU86 382 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 SGK494L7N484 410 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 STX16O14662 325 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 UGDHO60701 494 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 GALR3O60755 368 aaPredicted RBP15.3■□□□□ 0.04
CD28-203ENST00000458610 WFS1O76024 890 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 GSTA1P08263 222 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 HNF4AP41235 474 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 AGTR2P50052 363 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 RASA2Q15283 850 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 LACTB2Q53H82 288 aaPredicted RBP15.3■□□□□ 0.04
CD28-203ENST00000458610 IRAK1BP1Q5VVH5 260 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 LIPJQ5W064 366 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 MED27Q6P2C8 311 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 SHISA6Q6ZSJ9 500 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 TDRPQ86YL5 185 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 HPS6Q86YV9 775 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 PRSS58Q8IYP2 241 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 SRFBP1Q8NEF9 429 aaKnown RBP15.3■□□□□ 0.04
CD28-203ENST00000458610 CHD6Q8TD26 2715 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 CREB3L4Q8TEY5 395 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 ATP6V1E2Q96A05 226 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 REPS1Q96D71 796 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 MOCOSQ96EN8 888 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 OR1F2PQ96R84 312 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 RHBGQ9H310 441 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 EPB41L4BQ9H329 900 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 XPR1Q9UBH6 696 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 CELSR3Q9NYQ7 3312 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 ZFYVE26Q68DK2 2539 aa15.3■□□□□ 0.04
CD28-203ENST00000458610 IDSB3KWA1 339 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 BMP10O95393 424 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 ZNF888P0CJ79 500 aaPredicted RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 ACPPP15309 386 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 KRT15P19012 456 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms