RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 MYEF2Q9P2K5 600 aaKnown RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 PCDHGA3Q9Y5H0 932 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 A0A1B0GW55 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SLC30A4O14863 429 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CDRT1O95170 752 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4L2P0CJ85 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4L3P0CJ86 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4L4P0CJ87 422 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4L5P0CJ88 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4L6P0CJ89 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4L7P0CJ90 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 IVDP26440 423 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 ARFIP1P53367 373 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SNU13P55769 128 aaKnown RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 ADAM17P78536 824 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DHCR24Q15392 516 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 TCEANCQ8N8B7 351 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DCAF4L2Q8NA75 395 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 KIAA1191Q96A73 305 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 MMABQ96EY8 250 aaPredicted RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 MUS81Q96NY9 551 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CCNB1IP1Q9NPC3 277 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DUX4Q9UBX2 424 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 MAPRE3Q9UPY8 281 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 IFT172Q9UG01 1749 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 FAM171A2A8MVW0 826 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 E7EQ34 232 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 BPIP17213 487 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 ACRV1P26436 265 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SLC6A9P48067 706 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 APLP1P51693 650 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SH3BP2P78314 561 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 LRP8Q14114 963 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SGCBQ16585 318 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 DEFB134Q4QY38 66 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 C6orf136Q5SQH8 315 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 MARCH8Q5T0T0 291 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 TRNP1Q6NT89 227 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 ZZZ3Q8IYH5 903 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CMTR2Q8IYT2 770 aaKnown RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 TSSK6Q9BXA6 273 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 OR51I1Q9H343 314 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 RPRD1BQ9NQG5 326 aaKnown RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 TRPS1Q9UHF7 1281 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 USP22Q9UPT9 525 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 LTN1O94822 1766 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SGSHP51688 502 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 PNLIPRP1P54315 467 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CD47Q08722 323 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 ILF2Q12905 390 aaKnown RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 IQCCQ4KMZ1 466 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 KLHDC9Q8NEP7 349 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 FATE1Q969F0 183 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CMTM7Q96FZ5 175 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 APIPQ96GX9 242 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 ZNF334Q9HCZ1 680 aaPredicted RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 COPS7AQ9UBW8 275 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 IRAK3Q9Y616 596 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 ADAMDEC1O15204 470 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 TULP3O75386 442 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CSF2P04141 144 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 MYOGP15173 224 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 EDNRBP24530 442 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CCKBRP32239 447 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 TTKP33981 857 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 STARP49675 285 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 CYBRD1Q53TN4 286 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 OR9A1PQ8NGU1 263 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 GSDMCQ9BYG8 508 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 TRPV5Q9NQA5 729 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 SATB2Q9UPW6 733 aa7.73□□□□□ -1.17
RIF1-205ENST00000444746 XRN1Q8IZH2 1706 aaKnown RBP7.73□□□□□ -1.17
RIF1-205ENST00000444746 MAGEB3O15480 346 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 RAD1O60671 282 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 H6PDO95479 791 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 RPLP0P05388 317 aaKnown RBP7.72□□□□□ -1.17
RIF1-205ENST00000444746 CA3P07451 260 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 ZNF823P16415 610 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 CXCR1P25024 350 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 GJA8P48165 433 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 HM13Q8TCT9 377 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 NUDT8Q8WV74 236 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 KCMF1Q9P0J7 381 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 GNG8Q9UK08 70 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 Q9Y3F1 56 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 DNMT3AQ9Y6K1 912 aaPredicted RBP7.72□□□□□ -1.17
RIF1-205ENST00000444746 OR52A4PA6NMU1 304 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 SOCS2O14508 198 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 MID1O15344 667 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 NAA10P41227 235 aaPredicted RBP7.72□□□□□ -1.17
RIF1-205ENST00000444746 EEFSECP57772 596 aaKnown RBP7.72□□□□□ -1.17
RIF1-205ENST00000444746 HOXC5Q00444 222 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 ZNF776Q68DI1 518 aaPredicted RBP7.72□□□□□ -1.17
RIF1-205ENST00000444746 VTCN1Q7Z7D3 282 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 TMEM121BQ9BXQ6 578 aaPredicted RBP7.72□□□□□ -1.17
RIF1-205ENST00000444746 KLRF1Q9NZS2 232 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 MON2Q7Z3U7 1717 aa7.72□□□□□ -1.17
RIF1-205ENST00000444746 PSMA1P25786 263 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms