RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ERI3O43414 337 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 HCRTR1O43613 425 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 KLHL41O60662 606 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 PEX11AO75192 247 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 VPS4BO75351 444 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 CSO75390 466 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR2B3O76000 313 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 RSL1D1O76021 490 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 ETHE1O95571 254 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FAM107AO95990 144 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 CDK4P11802 303 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FOLR1P15328 257 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 PTX3P26022 381 aaPredicted RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 HNRNPH1P31943 449 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 PDX1P52945 283 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 ARFIP2P53365 341 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 PLA2G16P53816 162 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 ITGA1P56199 1179 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 STXBP1P61764 594 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 RPL38P63173 70 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF33BQ06732 778 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZFP36L1Q07352 338 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FOXM1Q08050 763 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 TGM3Q08188 693 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 C16orf72Q14CZ0 275 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 HKDC1Q2TB90 917 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM35AQ53FP2 167 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 GKAP1Q5VSY0 366 aaPredicted RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 KHDRBS2Q5VWX1 349 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FBXO42Q6P3S6 717 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 EPGNQ6UW88 154 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 RNF165Q6ZSG1 346 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 CHSY3Q70JA7 882 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 DGLUCYQ7Z3D6 616 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 TRIM46Q7Z4K8 759 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 ARHGAP22Q7Z5H3 698 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 DNAJC22Q8N4W6 341 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 TTC29Q8NA56 475 aaPredicted RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FNDC5Q8NAU1 212 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 AGBL5Q8NDL9 886 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 CREB3L4Q8TEY5 395 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 PPP3R2Q96LZ3 170 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 C3orf30Q96M34 536 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 DEPDC7Q96QD5 511 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR6C1Q96RD1 312 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 F2RL3Q96RI0 385 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 C17orf62Q9BQA9 187 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 EBF4Q9BQW3 602 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 C1orf50Q9BV19 199 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 MRPL1Q9BYD6 325 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 REXO4Q9GZR2 422 aaKnown RBP7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 TCF7L2Q9NQB0 619 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 FGF21Q9NSA1 209 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 STARD5Q9NSY2 213 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 SEMA5BQ9P283 1151 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 VPS29Q9UBQ0 182 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 LAMA1P25391 3075 aa7.55□□□□□ -1.2
HMGA1P4-201ENST00000428643 DCHS1Q96JQ0 3298 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 A0A0G2JN53 185 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 URADA6NGE7 173 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 EFCAB7A8K855 629 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMX2-CTNND1H3BSU7 103 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 TXNDC9O14530 226 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF195O14628 629 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 LSM1O15116 133 aaKnown RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZSCAN9O15535 394 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 HYAL3O43820 417 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SNX3O60493 162 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SRPX2O60687 465 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SEC22BO75396 215 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 MYO1DO94832 1006 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SEMA3DO95025 777 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 MT-CO3P00414 261 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CTSBP07858 339 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SERPINA6P08185 405 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF888P0CJ79 500 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CEACAM1P13688 526 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 LBPP18428 481 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CCKBRP32239 447 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SSR2P43308 183 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 GABRA4P48169 554 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 RAB8AP61006 207 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ACY1Q03154 408 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ACSM2AQ08AH3 577 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 PWP1Q13610 501 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CUL3Q13618 768 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 COL9A2Q14055 689 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 GRM7Q14831 915 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 RSPO4Q2I0M5 234 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ISXQ2M1V0 245 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 AP5B1Q2VPB7 878 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SPIN4Q56A73 249 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 TCTE1Q5JU00 501 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 WASHC2DQ5SRD0 308 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CDCP2Q5VXM1 449 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ACSM2BQ68CK6 577 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 TRIM40Q6P9F5 258 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CYB5D1Q6P9G0 228 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ABHD13Q7L211 337 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 COMMD6Q7Z4G1 85 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms