RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 CLCA4Q14CN2 919 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 ANKRD22Q5VYY1 191 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 LRRC66Q68CR7 880 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 SLC8B1Q6J4K2 584 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 BEST3Q8N1M1 668 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 CCDC106Q9BWC9 280 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 TMEM185BQ9H7F4 350 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 ZNF226Q9NYT6 803 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 GRHPRQ9UBQ7 328 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 ASCC3Q8N3C0 2202 aaKnown RBP11.8□□□□□ -0.52
SHANK2-203ENST00000409161 MYOM1P52179 1685 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 TRAV6A0A075B6T7 132 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 DECR1Q16698 335 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 CAMKVQ8NCB2 501 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 OR5T2Q8NGG2 359 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 PMM1Q92871 262 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 HSD17B14Q9BPX1 270 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 TMEM14AQ9Y6G1 99 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 TRAPPC13A5PLN9 417 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 ENGP17813 658 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 CMKLR1Q99788 373 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 MRI1Q9BV20 369 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 PSMD8P48556 350 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 CAPSQ13938 189 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 OTOP3Q7RTS5 596 aa11.8□□□□□ -0.52
SHANK2-203ENST00000409161 RBBP9O75884 186 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PTPRAP18433 802 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 CTNNB1P35222 781 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 FAPQ12884 760 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 HAVCR2Q8TDQ0 301 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ADAM7Q9H2U9 754 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ACP6Q9NPH0 428 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 MS4A12Q9NXJ0 267 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PABPC4LP0CB38 370 aaKnown RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PPP5CP53041 499 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 EPGNQ6UW88 154 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 EME2A4GXA9 379 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 DNASE1P24855 282 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ERVK-21P61565 698 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 HGSNATQ68CP4 663 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 UGT2A3Q6UWM9 527 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 WDR53Q7Z5U6 358 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PXKQ7Z7A4 578 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 JSRP1Q96MG2 331 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ST6GALNAC4Q9H4F1 302 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 J3QLW9 94 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 CLDN5O00501 218 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 SEPT4O43236 478 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 RGS9O75916 674 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ZNF19P17023 458 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 TACR2P21452 398 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 LUMP51884 338 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 SELENOVP59797 346 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 MRPL49Q13405 166 aaKnown RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 TRAM2Q15035 370 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 CEACAM20Q6UY09 585 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ADGRA1Q86SQ6 560 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 CFAP52Q8N1V2 620 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 SCRN2Q96FV2 425 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PREBQ9HCU5 417 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ZNF334Q9HCZ1 680 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 MAP2K3P46734 347 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 DPYSL2Q16555 572 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 GK3PQ14409 553 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ATP6AP1Q15904 470 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ZNF529Q6P280 563 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 CANT1Q8WVQ1 401 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 TMEM203Q969S6 136 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 C2orf92A0A1B0GVN3 265 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 RNASEH2AO75792 299 aaKnown RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ACTR1BP42025 376 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 HNRNPA0Q13151 305 aaKnown RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 MADCAM1Q13477 382 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 HS3ST5Q8IZT8 346 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 OR8J3Q8NGG0 315 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 TRUB1Q8WWH5 349 aaKnown RBP11.79□□□□□ -0.52
SHANK2-203ENST00000409161 FKBP10Q96AY3 582 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 ACBD6Q9BR61 282 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PCDHB11Q9Y5F2 797 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 PCDHGA2Q9Y5H1 932 aa11.79□□□□□ -0.52
SHANK2-203ENST00000409161 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
SHANK2-203ENST00000409161 POLR1CO15160 346 aaPredicted RBP11.78□□□□□ -0.52
SHANK2-203ENST00000409161 OXSR1O95747 527 aaPredicted RBP11.78□□□□□ -0.52
SHANK2-203ENST00000409161 KCNC3Q14003 757 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 BRAT1Q6PJG6 821 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 SIDT2Q8NBJ9 832 aaKnown RBP11.78□□□□□ -0.52
SHANK2-203ENST00000409161 ZCCHC3Q9NUD5 404 aaKnown RBP11.78□□□□□ -0.52
SHANK2-203ENST00000409161 MEIS2O14770 477 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 KLRK1P26718 216 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 MFSD3Q96ES6 412 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 TMEM41AQ96HV5 264 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 ALPK1Q96QP1 1244 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 AKTIPQ9H8T0 292 aa11.78□□□□□ -0.52
SHANK2-203ENST00000409161 CRTAC1Q9NQ79 661 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms