RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 ASMTP46597 345 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 WNT3P56703 355 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 DEPDC1Q5TB30 811 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 CLECL1Q8IZS7 167 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 NELL1Q92832 810 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 ITCHQ96J02 903 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 ANKRD27Q96NW4 1050 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 KLHL25Q9H0H3 589 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 RMND5AQ9H871 391 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 TMEM184CQ9NVA4 438 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 PCDHB14Q9Y5E9 798 aa18.82■□□□□ 0.6
RAB5C-202ENST00000393860 C15orf38-AP3S2A0A0A6YYH1 394 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 TRBC2A0A5B9 178 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 TLR4O00206 839 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 PPM1DO15297 605 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 NDUFS4O43181 175 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ANP32DO95626 131 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 CPSF4O95639 269 aaKnown RBP18.81■□□□□ 0.6
RAB5C-202ENST00000393860 C1QCP02747 245 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 HPCAL1P37235 193 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 BLKP51451 505 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 TAS2R50P59544 299 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 RACK1P63244 317 aaKnown RBP18.81■□□□□ 0.6
RAB5C-202ENST00000393860 UBE2IP63279 158 aaKnown RBP18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ABATP80404 500 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 TRAP1Q12931 704 aaKnown RBP18.81■□□□□ 0.6
RAB5C-202ENST00000393860 MUM1Q2TAK8 710 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ZNF385BQ569K4 471 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ARPINQ7Z6K5 226 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 DHFR2Q86XF0 187 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ZDHHC1Q8WTX9 485 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ZNF717Q9BY31 904 aaPredicted RBP18.81■□□□□ 0.6
RAB5C-202ENST00000393860 AICDAQ9GZX7 198 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 KCNH6Q9H252 994 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 SH3BP4Q9P0V3 963 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 STOML1Q9UBI4 398 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 ADGRE2Q9UHX3 823 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 USP34Q70CQ2 3546 aa18.81■□□□□ 0.6
RAB5C-202ENST00000393860 CCNDBP1O95273 360 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 TPP2P29144 1249 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 GRK3P35626 688 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 GRIA3P42263 894 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 EEFSECP57772 596 aaKnown RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 OR4D2P58180 307 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 SRSF11Q05519 484 aaKnown RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 C2orf80Q0P641 193 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 LRRC74BQ6ZQY2 392 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 TMEM132CQ8N3T6 1108 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 FLVCR1-AS1Q8TAF5 88 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 LMX1AQ8TE12 382 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 CREB3L4Q8TEY5 395 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 FCRL4Q96PJ5 515 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 THUMPD3Q9BV44 507 aaKnown RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 DUSP26Q9BV47 211 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 KLHL31Q9H511 634 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 SIRT5Q9NXA8 310 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 BCAP29Q9UHQ4 241 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 MCM8Q9UJA3 840 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 MAN2B2Q9Y2E5 1009 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 A0A096LPI6 279 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 RFXANKO14593 260 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 ARPC2O15144 300 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 IL3P08700 152 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 UGT2B7P16662 529 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 COL9A2Q14055 689 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 CCNYL2Q5T2Q4 361 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 CPTPQ5TA50 214 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 SPPL2CQ8IUH8 684 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 FAM174AQ8TBP5 190 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 LRGUKQ96M69 825 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 NECAB3Q96P71 396 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 OR2A14Q96R47 310 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 PITHD1Q9GZP4 211 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-202ENST00000393860 PCED1AQ9H1Q7 454 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 LHX9Q9NQ69 397 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 POT1Q9NUX5 634 aa18.8■□□□□ 0.6
RAB5C-202ENST00000393860 VCANP13611 3396 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 TRBV5-3A0A0A0MS03 114 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 SCN2BO60939 215 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 STAMBPO95630 424 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 CSF2P04141 144 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 PTPN6P29350 595 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 BSGP35613 385 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 CSNK1EP49674 416 aaKnown RBP18.79■□□□□ 0.6
RAB5C-202ENST00000393860 PLA2G16P53816 162 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 MAZP56270 477 aaKnown RBP18.79■□□□□ 0.6
RAB5C-202ENST00000393860 C21orf58P58505 322 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 DPY19L1Q2PZI1 675 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 RUNDC3AQ59EK9 446 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 CWF19L1Q69YN2 538 aaKnown RBP18.79■□□□□ 0.6
RAB5C-202ENST00000393860 ZNF425Q6IV72 752 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 UBE3DQ7Z6J8 389 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 DCP2Q8IU60 420 aaKnown RBP18.79■□□□□ 0.6
RAB5C-202ENST00000393860 AMER3Q8N944 861 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 OR8J3Q8NGG0 315 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.79■□□□□ 0.67e-7■■■■□ 23.6
RAB5C-202ENST00000393860 REEP4Q9H6H4 257 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 ACTR10Q9NZ32 417 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 AHSPQ9NZD4 102 aa18.79■□□□□ 0.6
RAB5C-202ENST00000393860 KIR2DS5A0A0G2JLQ3 304 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms