RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PRAMEF10O60809 474 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 MOCS2O96007 188 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 NUDT7P0C024 238 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 JUNDP17535 347 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SLC1A3P43003 542 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 HMGCS2P54868 508 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TSPAN5P62079 268 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 ROR1Q01973 937 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TTC29Q8NA56 475 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 C19orf18Q8NEA5 215 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 OR2T4Q8NH00 348 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 ISL2Q96A47 359 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 C14orf144Q96I85 54 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 FCRL3Q96P31 734 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 COL21A1Q96P44 957 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 MSTO1Q9BUK6 570 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 WDR11Q9BZH6 1224 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 C3orf14Q9HBI5 128 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TREM2Q9NZC2 230 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TBX20Q9UMR3 447 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 HES2Q9Y543 173 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 A0A075B6Q4 140 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 MT-CYBP00156 380 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TSPAN19P0C672 248 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PFKLP17858 780 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 ATP5A1P25705 553 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 GSK3BP49841 420 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 TNFRSF17Q02223 184 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 CYP24A1Q07973 514 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 DMP1Q13316 513 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 HADHQ16836 314 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PLBD1Q6P4A8 553 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SLC46A3Q7Z3Q1 461 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 ENTHD1Q8IYW4 607 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 CPXCR1Q8N123 301 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 NAGSQ8N159 534 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF655Q8N720 491 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 DNERQ8NFT8 737 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 CLEC4DQ8WXI8 215 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SFXN2Q96NB2 322 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 RBM4BQ9BQ04 359 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 RBM4Q9BWF3 364 aaKnown RBP9.06□□□□□ -0.96
PTPRA-204ENST00000380393 PIF1Q9H611 641 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SMPD4Q9NXE4 827 aa9.06□□□□□ -0.96
PTPRA-204ENST00000380393 SSC5DA1L4H1 1573 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 FFAR3O14843 346 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GPR42O15529 346 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CHP2O43745 196 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ATG7O95352 703 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ANXA3P12429 323 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CYP4B1P13584 511 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 TIMP2P16035 220 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SPI1P17947 270 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 NFKB1P19838 968 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 LHCGRP22888 699 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CD86P42081 329 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 BCAT1P54687 386 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 RIPPLY1Q0D2K3 151 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 FRG1Q14331 258 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GANABQ14697 944 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 KCNAB1Q14722 419 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SERINC5Q86VE9 423 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SVOPLQ8N434 492 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CD244Q9BZW8 370 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ELP3Q9H9T3 547 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 OXSMQ9NWU1 459 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PLIN4Q96Q06 1357 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 NEDD8-MDP1E9PL57 170 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CACNB4O00305 520 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 LILRB3O75022 631 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SLC43A1O75387 559 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MT-CO1P00395 513 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GNSP15586 552 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MUC1P15941 1255 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CTPS1P17812 591 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ACO1P21399 889 aaKnown RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PRKACGP22612 351 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SSTR4P31391 388 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CLDN20P56880 219 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF252P-AS1Q0IIN9 211 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SEMA5AQ13591 1074 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 RAB33AQ14088 237 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 VGLL4Q14135 290 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 GRM3Q14832 879 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 SUPT20HL1Q3ZLR7 823 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 AVPI1Q5T686 147 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 LAIR1Q6GTX8 287 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CYS1Q717R9 158 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 RAB44Q7Z6P3 723 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PRR18Q8N4B5 295 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 CDYL2Q8N8U2 506 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.05□□□□□ -0.965e-7■■■■■ 65.3
PTPRA-204ENST00000380393 CREB3L4Q8TEY5 395 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 FCGR1BQ92637 280 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 KLRG1Q96E93 195 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 MRGPRX2Q96LB1 330 aa9.05□□□□□ -0.96
PTPRA-204ENST00000380393 EBNA1BP2Q99848 306 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms