RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CRLS1Q9UJA2 301 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TMA7Q9Y2S6 64 aaKnown RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 BRCA2P51587 3418 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 FAM172BPA6NC97 362 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 SUV39H1O43463 412 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 SEMG1P04279 462 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 RB1P06400 928 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 COX7A2P14406 83 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 MAPK1P28482 360 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 RACK1P63244 317 aaKnown RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 MN1Q10571 1320 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 C10orf62Q5T681 223 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 SLX4IPQ5VYV7 408 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 NRARPQ7Z6K4 114 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 FAM9CQ8IZT9 166 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TRMT2BQ96GJ1 504 aaKnown RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 SAMD11Q96NU1 681 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 EXOSC4Q9NPD3 245 aaKnown RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TMEM184CQ9NVA4 438 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 YIPF1Q9Y548 306 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TNFRSF11BO00300 401 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 HOXC11O43248 304 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 ITGALP20701 1170 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 HMGCLP35914 325 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 HTR3AP46098 478 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 RPIAP49247 311 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 CSTF3Q12996 717 aaKnown RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 ANGPTL8Q6UXH0 198 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 ADGRG2Q8IZP9 1017 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 SLC5A8Q8N695 610 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TP53INP1Q96A56 240 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 DEPDC7Q96QD5 511 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 GABARAPL3Q9BY60 117 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TM6SF2Q9BZW4 377 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 CCDC177Q9NQR7 707 aaPredicted RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 DUSP12Q9UNI6 340 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 PCDHGB3Q9Y5G1 929 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 PIKFYVEQ9Y2I7 2098 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 H3BNC9 293 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 AGRPO00253 132 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 OPN1SWP03999 348 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 EPORP19235 508 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
CCDC40-203ENST00000374877 RHOAP61586 193 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 ARF5P84085 180 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 FBXO43Q4G163 708 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 NOXRED1Q6NXP6 359 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 RTL10Q7L3V2 364 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 ASCC1Q8N9N2 400 aaKnown RBP10.69□□□□□ -0.7
CCDC40-203ENST00000374877 OR10G2Q8NGC3 310 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 NEDD4LQ96PU5 975 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 SLC30A2Q9BRI3 323 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 SLC32A1Q9H598 525 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 RLIMQ9NVW2 624 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 ADPRHL2Q9NX46 363 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 FCF1Q9Y324 198 aaKnown RBP10.69□□□□□ -0.7
CCDC40-203ENST00000374877 LINC01553A4QN01 128 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 CENPXA8MT69 81 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 TFECO14948 347 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-203ENST00000374877 TEX28O15482 410 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 CLDN11O75508 207 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 IRF1P10914 325 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 POU2F1P14859 743 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 GPX2P18283 190 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 CXCR2P25025 360 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 CTNNB1P35222 781 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 CASP9P55211 416 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 NFATC2Q13469 925 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 DDX39BQ13838 428 aaKnown RBP10.69□□□□□ -0.7
CCDC40-203ENST00000374877 VEPH1Q14D04 833 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 TSTQ16762 297 aaKnown RBP10.69□□□□□ -0.7
CCDC40-203ENST00000374877 ARMC4Q5T2S8 1044 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 FAM124AQ86V42 546 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 UBTD2Q8WUN7 234 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 PIK3R3Q92569 461 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 CMTM7Q96FZ5 175 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 EPYCQ99645 322 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 TPT1P8Q9HAU6 139 aa10.69□□□□□ -0.7
CCDC40-203ENST00000374877 KRT87PA6NCN2 255 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 SH3BGRLO75368 114 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 SF1Q15637 639 aaKnown RBP10.68□□□□□ -0.7
CCDC40-203ENST00000374877 GPRC6AQ5T6X5 926 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 NEK5Q6P3R8 708 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 NCEH1Q6PIU2 408 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 RNF165Q6ZSG1 346 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 C7orf34Q96L11 122 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 OR5M11Q96RB7 305 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 PLCXD1Q9NUJ7 323 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 MS4A12Q9NXJ0 267 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 TAS2R9Q9NYW1 312 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 FZD4Q9ULV1 537 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 CFL2Q9Y281 166 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ADH1AP07327 375 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 PRPS1L1P21108 318 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 ITPKAP23677 461 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 OR1E2P47887 323 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 CDH12P55289 794 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 OLR1P78380 273 aa10.68□□□□□ -0.7
CCDC40-203ENST00000374877 KCNJ10P78508 379 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms