RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 KCNE1BA0A087WTH5 132 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 WWP2O00308 870 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 LRRTM2O43300 516 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 NUAK1O60285 661 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 IGFBP1P08833 259 aaPredicted RBP11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 HLA-EP13747 358 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 CD9P21926 228 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 PSMA3P25788 255 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 HNRNPFP52597 415 aaKnown RBP11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 ST3GAL4Q11206 333 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 FAHD1Q6P587 224 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 TTC23LQ6PF05 361 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 CBLL1Q75N03 491 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 DNAJC22Q8N4W6 341 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 ZNF486Q96H40 463 aaPredicted RBP11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 CCM2Q9BSQ5 444 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 SLC32A1Q9H598 525 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 TRIM39Q9HCM9 518 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 PLSCR3Q9NRY6 295 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 ZNF226Q9NYT6 803 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
CCDC144CP-201ENST00000340196 TMEM202A6NGA9 273 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 TFECO14948 347 aaPredicted RBP11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 CCNKO75909 580 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 MFN2O95140 757 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 ETFAP13804 333 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 AOAHP28039 575 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 POU1F1P28069 291 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 PIK3CBP42338 1070 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 ITGA1P56199 1179 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 CXCR4P61073 352 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 GPR17Q13304 367 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 TAB1Q15750 504 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 DUOXA1Q1HG43 343 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 LEXMQ3ZCV2 418 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 BCL7AQ4VC05 210 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 IER5LQ5T953 404 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 KIAA1958Q8N8K9 716 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 TXNDC15Q96J42 360 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 UGT2A1Q9Y4X1 527 aa11.52□□□□□ -0.56
CCDC144CP-201ENST00000340196 KIAA0513O60268 411 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 C9P02748 559 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 CKMT1AP12532 417 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 OR1D2P34982 312 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 TSTA3Q13630 321 aaPredicted RBP11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 TSTQ16762 297 aaKnown RBP11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 EXOC3L2Q2M3D2 409 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 C5orf22Q49AR2 442 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 ADGRF1Q5T601 910 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 EIF3MQ7L2H7 374 aaKnown RBP11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 NRARPQ7Z6K4 114 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 NXPE1Q8N323 547 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 STX19Q8N4C7 294 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 MINDY2Q8NBR6 621 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 HRASLS5Q96KN8 279 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 MS4A12Q9NXJ0 267 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 EHD3Q9NZN3 535 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 PCDHGB6Q9Y5F9 930 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 LYVE1Q9Y5Y7 322 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 CFAP20Q9Y6A4 193 aaKnown RBP11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.57
CCDC144CP-201ENST00000340196 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 PNMA8CA0A1B0GUJ8 204 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 E7EQ34 232 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 TNFRSF11BO00300 401 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 PCDH17O14917 1159 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 RGS5O15539 181 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 TRBC1P01850 177 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 SELPP16109 830 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 CXCR2P25025 360 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 SOX3P41225 446 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 CRATP43155 626 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 CTSOP43234 321 aaPredicted RBP11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 SPIBQ01892 262 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 PPIGQ13427 754 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 GPNMBQ14956 572 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 FRG2Q64ET8 278 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 TPGS1Q6ZTW0 290 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 SERPINA11Q86U17 422 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 OR8H2Q8N162 312 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 B3GNT7Q8NFL0 401 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 FRG2BQ96QU4 278 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 MMP27Q9H306 513 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 CPNE5Q9HCH3 593 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 EXOSC4Q9NPD3 245 aaKnown RBP11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 GPATCH2Q9NW75 528 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 NDUFAF4Q9P032 175 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 DNMT3AQ9Y6K1 912 aaPredicted RBP11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 CDK1P06493 297 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 RGS6P49758 472 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 MC1RQ01726 317 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 FADDQ13158 208 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 CDH18Q13634 790 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 DMC1Q14565 340 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms