RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 EPORP19235 508 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 CD72P21854 359 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 CCR7P32248 378 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 SOAT1P35610 550 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 C5orf22Q49AR2 442 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 IQCCQ4KMZ1 466 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 TRIM69Q86WT6 500 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 C2orf69Q8N8R5 385 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 SPATA17Q96L03 361 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 C7orf34Q96L11 122 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 SMURF1Q9HCE7 757 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 TRIM39Q9HCM9 518 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 TMEM184CQ9NVA4 438 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 PCDHGA3Q9Y5H0 932 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 CCNB2O95067 398 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 EOMESO95936 686 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 ITGA2P17301 1181 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
FOXP4-201ENST00000307972 HTR3AP46098 478 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 RGNQ15493 299 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
FOXP4-201ENST00000307972 RNF165Q6ZSG1 346 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 UBE2J2Q8N2K1 259 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 C1orf52Q8N6N3 182 aaKnown RBP11.3□□□□□ -0.6
FOXP4-201ENST00000307972 VANGL1Q8TAA9 524 aaPredicted RBP11.3□□□□□ -0.6
FOXP4-201ENST00000307972 NEDD4LQ96PU5 975 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 PAQR5Q9NXK6 330 aaPredicted RBP11.3□□□□□ -0.6
FOXP4-201ENST00000307972 FBXL12Q9NXK8 326 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 NDUFAF4Q9P032 175 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 KLK4Q9Y5K2 254 aa11.3□□□□□ -0.6
FOXP4-201ENST00000307972 PATJQ8NI35 1801 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 H3BM21 787 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 AP3D1O14617 1153 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PCDH7O60245 1069 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 C8GP07360 202 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CBSLP0DN79 551 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 ETFAP13804 333 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 AOAHP28039 575 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CBSP35520 551 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CHI3L1P36222 383 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 RACK1P63244 317 aaKnown RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SELENOWP63302 87 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PLD1Q13393 1074 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 NXNL2Q5VZ03 156 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SLC44A2Q8IWA5 706 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 BBS7Q8IWZ6 715 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SIGLEC11Q96RL6 698 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 FAM129BQ96TA1 746 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SGK2Q9HBY8 427 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 C11orf16Q9NQ32 467 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 RHCGQ9UBD6 479 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 RAB23Q9ULC3 237 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SMAD6O43541 496 aaKnown RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PRMT3O60678 531 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 MTX2O75431 263 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CD160O95971 181 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CKMT1AP12532 417 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 HLA-EP13747 358 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 ATF6P18850 670 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PSMA1P25786 263 aaKnown RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 HNMTP50135 292 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 KCNA10Q16322 511 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PDZK1Q5T2W1 519 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 FUT10Q6P4F1 479 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 FAM131AQ6UXB0 335 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 FAM124AQ86V42 546 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 FAM217AQ8IXS0 508 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 OR4K1Q8NGD4 311 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 OR6F1Q8NGZ6 308 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 C2orf49Q9BVC5 232 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 BEX2Q9BXY8 128 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 RETREG1Q9H6L5 497 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 MN1Q10571 1320 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 H3BN98 237 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 H7C4K7 107 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 GAPDHSO14556 408 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 FZD6O60353 706 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SNX4O95219 450 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 GADD45GO95257 159 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 CHRM5P08912 532 aaPredicted RBP11.29□□□□□ -0.6
FOXP4-201ENST00000307972 ACPPP15309 386 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 PCSK2P16519 638 aa11.29□□□□□ -0.6
FOXP4-201ENST00000307972 SERPINA4P29622 427 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms