RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CFAP52Q8N1V2 620 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 CLDN19Q8N6F1 224 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 LPCAT1Q8NF37 534 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 CEP76Q8TAP6 659 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 HDHD2Q9H0R4 259 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 FKBPLQ9UIM3 349 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 CLEC4AQ9UMR7 237 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 ARNTLO00327 626 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 OR7A17O14581 309 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 KPNA5O15131 536 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 PLA2G10O15496 165 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 PDE9AO76083 593 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 TBX18O95935 607 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 F9P00740 461 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 GNPDA1P46926 289 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 RENBPP51606 427 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 SLC14A2Q15849 920 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 TOR1AIP1Q5JTV8 583 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 GDF6Q6KF10 455 aaPredicted RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 OR10G2Q8NGC3 310 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 ZNF431Q8TF32 576 aaPredicted RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 FBLIM1Q8WUP2 373 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 C1GALT1C1Q96EU7 318 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 COPS8Q99627 209 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 GDF15Q99988 308 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 LATS2Q9NRM7 1088 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 MED16Q9Y2X0 877 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 LOC730098B7Z3J9 87 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 CLIC1O00299 241 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 AOC2O75106 756 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 ESR1P03372 595 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 KDELR2P33947 212 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 SEMG2Q02383 582 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 C5orf22Q49AR2 442 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 KCTD20Q7Z5Y7 419 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 RHEBL1Q8TAI7 183 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 CCDC115Q96NT0 180 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 TSGA13Q96PP4 275 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 RLFQ13129 1914 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 ANK1P16157 1881 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 TMEM88BA6NKF7 163 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 POM121CA8CG34 1229 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 FADS2P1A8MWK0 482 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 MUSKO15146 869 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 SIGLEC5O15389 551 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 RETP07949 1114 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 SIGLEC14Q08ET2 396 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 GALEQ14376 348 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 FRMPD2BQ6IN97 320 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 TYW3Q6IPR3 259 aaKnown RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 METTL23Q86XA0 190 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 BEST4Q8NFU0 473 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 QRFPRQ96P65 431 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 FAM193BQ96PV7 902 aaPredicted RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 C2orf49Q9BVC5 232 aaPredicted RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 DERL2Q9GZP9 239 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 RACGAP1Q9H0H5 632 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.37□□□□□ -0.43
HERC6-202ENST00000273960 HEBP1Q9NRV9 189 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 ZNF226Q9NYT6 803 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 RGS14O43566 566 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 ASGR1P07306 291 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 MAP2K3P46734 347 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 HCAR3P49019 387 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 CRYBB1P53674 252 aaPredicted RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 PTPN5P54829 565 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 PRKCZQ05513 592 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 SCAPQ12770 1279 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 TMEM65Q6PI78 240 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 LGI4Q8N135 537 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 Q8N402 240 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 FBXW5Q969U6 566 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 IMP4Q96G21 291 aaKnown RBP12.37□□□□□ -0.43
HERC6-202ENST00000273960 NFKBIZQ9BYH8 718 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 RDH8Q9NYR8 311 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 PCDHGC4Q9Y5F7 938 aa12.37□□□□□ -0.43
HERC6-202ENST00000273960 GTPBP1O00178 669 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 NPPAP01160 153 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 SRCP12931 536 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 HLA-DPA1P20036 260 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 ALAS2P22557 587 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 PSMA1P25786 263 aaKnown RBP12.36□□□□□ -0.43
HERC6-202ENST00000273960 SDC2P34741 201 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 SCNN1AP37088 669 aa12.36□□□□□ -0.43
HERC6-202ENST00000273960 ZNF81P51508 661 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms