RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CLEC2LP0C7M8 214 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 PCMT1P22061 227 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 EVI2BP34910 448 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 MAP2K3P46734 347 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 TARDBPQ13148 414 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP30-201ENST00000257548 B3GLCTQ6Y288 498 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 MON1AQ86VX9 555 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 FAM9CQ8IZT9 166 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 ZNF557Q8N988 423 aaPredicted RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 RIT1Q92963 219 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 TBX5Q99593 518 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 MRM3Q9HC36 420 aaKnown RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 CD84Q9UIB8 345 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 TMEFF2Q9UIK5 374 aaPredicted RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 PPIEQ9UNP9 301 aaKnown RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 AP3M1Q9Y2T2 418 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 ARL5CA6NH57 179 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 CLDN24A6NM45 220 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 J3KTA2 159 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 INSIG1O15503 277 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 HOXD8P13378 290 aaPredicted RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 ITGA2P17301 1181 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 APEX1P27695 318 aaKnown RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 ERP29P30040 261 aaKnown RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 GPC1P35052 558 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 SLC19A1P41440 591 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 SEMA3BQ13214 749 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 IDNKQ5T6J7 187 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 FAM20CQ8IXL6 584 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 C3orf58Q8NDZ4 430 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 YIPF6Q96EC8 236 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 DUSP26Q9BV47 211 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 RLIMQ9NVW2 624 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 MUSKO15146 869 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 SMPD1P17405 629 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 CLPPQ16740 277 aaPredicted RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 SPATS1Q496A3 300 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 IFI44LQ53G44 452 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 MTFR2Q6P444 385 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 HDDC2Q7Z4H3 204 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 GPR149Q86SP6 731 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 LRRTM3Q86VH5 581 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 IQCF2Q8IXL9 164 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 UBQLNLQ8IYU4 475 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 HJURPQ8NCD3 748 aaPredicted RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 BEST4Q8NFU0 473 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 OTUB1Q96FW1 271 aaPredicted RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 APIPQ96GX9 242 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 ADAM2Q99965 735 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 TLR9Q9NR96 1032 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 CLCA2Q9UQC9 943 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 SLC16A6O15403 523 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 DHFRP00374 187 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 CYP17A1P05093 508 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 GRK5P34947 590 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 NAE1Q13564 534 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 PTCHD3Q3KNS1 767 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 CXCL17Q6UXB2 119 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 IQCF1Q8N6M8 205 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 NT5C3BQ969T7 300 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 BTN2A3PQ96KV6 586 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 CDCP1Q9H5V8 836 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 ANKHQ9HCJ1 492 aa11.91□□□□□ -0.5
USP30-201ENST00000257548 ZFP37Q9Y6Q3 630 aaPredicted RBP11.91□□□□□ -0.5
USP30-201ENST00000257548 LOC105369274A0A096LPK9 316 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 HMX3A6NHT5 357 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 PTGESO14684 152 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 SLC30A4O14863 429 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 SGTAO43765 313 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 TP53P04637 393 aaPredicted RBP11.9□□□□□ -0.5
USP30-201ENST00000257548 RETP07949 1114 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 MMP3P08254 477 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 ETFAP13804 333 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 ANXA8P13928 327 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 SDC2P34741 201 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 HOXC5Q00444 222 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 ATG9BQ674R7 924 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 GLB1LQ6UWU2 654 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 SLC46A3Q7Z3Q1 461 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 LACC1Q8IV20 430 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 OR4N4Q8N0Y3 316 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 C10orf111Q8N326 155 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 DPP10Q8N608 796 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 CD200R1Q8TD46 325 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 SLC7A6Q92536 515 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 MED30Q96HR3 178 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 TINF2Q9BSI4 451 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 POLR2J3Q9H1A7 115 aaKnown RBP11.9□□□□□ -0.5
USP30-201ENST00000257548 KDM4BO94953 1096 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 CDK1P06493 297 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 CD52P31358 61 aa11.9□□□□□ -0.5
USP30-201ENST00000257548 AVPR1BP47901 424 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms