RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 LPGAT1Q92604 370 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 C6orf62Q9GZU0 229 aaPredicted RBP4.11□□□□□ -1.75
CFTR-201ENST00000003084 COMMD4Q9H0A8 199 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 PTGES2Q9H7Z7 377 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 NFKBIL1Q9UBC1 381 aaPredicted RBP4.11□□□□□ -1.75
CFTR-201ENST00000003084 PPM1HQ9ULR3 514 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 SLC22A14Q9Y267 594 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 A0A1W2PRX2 142 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 TCRBV7S3A2A0A539 114 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 SH3PXD2BA1X283 911 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 TRIM43BA6NCK2 446 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 IGLON5A6NGN9 336 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 A8MU76 341 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 PTGES3LE9PB15 166 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 GFRA2O00451 464 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 E2F3O00716 465 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 NBNO60934 754 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 PRAMEF12O95522 483 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 PLGP00747 810 aaPredicted RBP4.11□□□□□ -1.75
CFTR-201ENST00000003084 SERPINA3P01011 423 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 FURINP09958 794 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 C1GALT1C1LP0DN25 315 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 CDH1P12830 882 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 GP1BBP13224 206 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 HOXD8P13378 290 aaPredicted RBP4.11□□□□□ -1.75
CFTR-201ENST00000003084 DNASE1L1P49184 302 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 LRP8Q14114 963 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 SF3B4Q15427 424 aaKnown RBP eCLIP4.11□□□□□ -1.75
CFTR-201ENST00000003084 NEDD8Q15843 81 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 SMU1Q2TAY7 513 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 KLHL22Q53GT1 634 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 SPANXN2Q5MJ10 180 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 C1orf220Q5T0J3 134 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 ARMC4Q5T2S8 1044 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 FAM69BQ5VUD6 431 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 ARL10Q8N8L6 244 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 ZNF419Q96HQ0 510 aaPredicted RBP4.11□□□□□ -1.75
CFTR-201ENST00000003084 FCRL4Q96PJ5 515 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 ASPNQ9BXN1 380 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 CRISPLD1Q9H336 500 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 CLK4Q9HAZ1 481 aaKnown RBP4.11□□□□□ -1.75
CFTR-201ENST00000003084 TMEM184CQ9NVA4 438 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 KLRF1Q9NZS2 232 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 B4GALT7Q9UBV7 327 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 RARRES3Q9UL19 164 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 IFT52Q9Y366 437 aa4.11□□□□□ -1.75
CFTR-201ENST00000003084 ABCA3Q99758 1704 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 MSTNO14793 375 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 REM1O75628 298 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 GADD45GO95257 159 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 TGFB1P01137 390 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 IGHEP01854 428 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 ZCCHC18P0CG32 403 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 POLR2CP19387 275 aaPredicted RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 CD70P32970 193 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 CAPGP40121 348 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 CTSKP43235 329 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 KCNC1P48547 511 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 SCAND1P57086 179 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 SEMG2Q02383 582 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 ELOAQ14241 798 aaKnown RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 PDK3Q15120 406 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 ZNF630Q2M218 657 aaPredicted RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 RAB41Q5JT25 222 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.1□□□□□ -1.75
CFTR-201ENST00000003084 RSBN1Q5VWQ0 802 aaPredicted RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 TXNRD3NBQ6F5E7 133 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 KRT74Q7RTS7 529 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 TMCO2Q7Z6W1 182 aaPredicted RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 AMIGO1Q86WK6 493 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 TMEM156Q8N614 296 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 C1orf52Q8N6N3 182 aaKnown RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 OR4F6Q8NGB9 312 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 OR5L2Q8NGL0 311 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 PNPT1Q8TCS8 783 aaKnown RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 GEMIN6Q8WXD5 167 aaKnown RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 ARMC5Q96C12 935 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 MRPL38Q96DV4 380 aaKnown RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 CENPNQ96H22 339 aaPredicted RBP4.1□□□□□ -1.75
CFTR-201ENST00000003084 PPM1MQ96MI6 270 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 KCNC2Q96PR1 638 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 ZNF382Q96SR6 550 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 PAAF1Q9BRP4 392 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 LRRC3Q9BY71 257 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 ZBP1Q9H171 429 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 METTL7AQ9H8H3 244 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 SP140LQ9H930 580 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 CSNK1G1Q9HCP0 422 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 NRIP3Q9NQ35 241 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 DNAJB9Q9UBS3 223 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 PCDHGB5Q9Y5G0 923 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 ENTPD2Q9Y5L3 495 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 SESN1Q9Y6P5 492 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 OR6C74A6NCV1 312 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 BCKDKO14874 412 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 EREGO14944 169 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 GSC2O15499 205 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 PRODHO43272 600 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 DFNA5O60443 496 aa4.1□□□□□ -1.75
CFTR-201ENST00000003084 NME6O75414 186 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms