RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 ClockO08785 855 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gal3st3P61315 431 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Tsc22d1P62500 1077 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Dab1P97318 588 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Bpifa1P97361 278 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Apcdd1Q3U128 514 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gngt2Q61017 69 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zc3h11aQ6NZF1 792 aaKnown RBP15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Dennd5aQ6PAL8 1287 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Slco4c1Q8BGD4 722 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Eme1Q8BJW7 570 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Piwil4Q8CGT6 848 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Chrna3Q8R4G9 499 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gtf2h3Q8VD76 309 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zdhhc5Q8VDZ4 715 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Kat8Q9D1P2 458 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Lcn9Q9D267 178 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Dgat2Q9DCV3 388 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr630Q9EQQ7 319 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fbxo47A2A6H3 451 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zfp809G3X9G7 402 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zfp607bG3X9H3 648 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hcn4O70507 1186 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Otud6aQ6IE21 290 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Tmem164Q6PHN7 296 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1085Q7TR64 313 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Lats2Q7TSJ6 1042 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Q8BHR8 331 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cdkl1Q8CEQ0 352 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rab15Q8K386 212 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cd209eQ91ZW7 208 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Hnrnpa0Q9CX86 305 aaKnown RBP15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Agpat5Q9D1E8 365 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cts6Q9ET52 334 aa15.29■□□□□ 0.04
Trim39-203ENSMUST00000113706 F2rl3O88634 396 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ccr3P51678 359 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rps13P62301 151 aaKnown RBP15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ezh1P70351 747 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rpl10lP86048 214 aaKnown RBP15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ap5b1Q3TAP4 876 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 VclQ64727 1066 aaKnown RBP15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cpne3Q8BT60 533 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gm13199Q8C8E0 125 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr1Q8VGI1 314 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Chid1Q922Q9 393 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Snx7Q9CY18 387 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ndufv2Q9D6J6 248 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Dyrk1bQ9Z188 629 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gm28729A0A1B0GSW2 409 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Trmt1lA2RSY6 728 aaKnown RBP15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Phf11cB4XVP9 339 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 PrlhrQ6VMN6 370 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 SheQ8BSD5 492 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Samd14Q8K070 417 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ints14Q8R3P6 515 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 SharpinQ91WA6 380 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gipc2Q9Z2H7 314 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ifi213D3Z5G0 586 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Gm16427J3QN52 483 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Sult2b1O35400 338 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 mt-Co3P00416 261 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ruvbl1P60122 456 aaKnown RBP15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr616Q3KPB0 317 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Kctd21Q3URF8 260 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Il15raQ60819 263 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fzd3Q61086 666 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr525Q8VGL5 309 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Ist1Q9CX00 362 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Cntd1Q9D995 334 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Xylt2Q9EPL0 865 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Slc6a14Q9JMA9 638 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Zscan12Q9Z1D7 501 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Thbs4Q9Z1T2 963 aa15.28■□□□□ 0.04
Trim39-203ENSMUST00000113706 Alms1Q8K4E0 3251 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Rpl7a-ps3A0A140T8L1 270 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Slc25a54B1AUS6 473 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Serpinb9eO08806 377 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Angpt2O35608 496 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Foxq1O70220 400 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 H2-Q8P14430 326 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Slc11a1P41251 548 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 AhcyP50247 432 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 H2-Q6P79568 326 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Psme2P97372 239 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Kcnh6Q32ME0 950 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Sema4cQ64151 834 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Fastkd3Q8BSN9 661 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Dcun1d3Q8K0V2 304 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Olfr850Q8VFF2 315 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Chst15Q91XQ5 561 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Atp6v1c2Q99L60 427 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Q9CXL3 195 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 PyurfQ9D1C3 112 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 5330417H12RikQ9D3P2 110 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Tssc4Q9JHE7 317 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 TrehQ9JLT2 576 aa15.27■□□□□ 0.04
Trim39-203ENSMUST00000113706 Tcrg-V3A0A0G2JEW2 117 aa15.27■□□□□ 0.03
Trim39-203ENSMUST00000113706 Cd300ld2A2A7W0 305 aa15.27■□□□□ 0.03
Trim39-203ENSMUST00000113706 Man1b1A2AJ15 658 aa15.27■□□□□ 0.03
Trim39-203ENSMUST00000113706 Adamtsl5D3Z689 485 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms