RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	ZNF544	Q6NX49	715 aa		13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	CRTC1	Q6UUV9	634 aa		13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	CALHM3	Q86XJ0	350 aa		13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	SLC29A3	Q9BZD2	475 aa		13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	ABT1	Q9ULW3	272 aa	Known RBP	13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	AP3M1	Q9Y2T2	418 aa		13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	YIPF1	Q9Y548	306 aa		13.98	□□□□□ -0.17
SMTN-223	ENST00000619644	TMEM88B	A6NKF7	163 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644		A8MV72	311 aa	Predicted RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	PCDHGA12	O60330	932 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	APOA1	P02647	267 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CD70	P32970	193 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	UGT2B10	P36537	528 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	DEFA1	P59665	94 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	DEFA3	P59666	94 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CHRNE	Q04844	493 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	SMARCB1	Q12824	385 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	NPRL3	Q12980	569 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CAMK2G	Q13555	558 aa	Predicted RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	KRR1	Q13601	381 aa	Known RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	ZFP69	Q49AA0	526 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	DGKK	Q5KSL6	1271 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	MACC1	Q6ZN28	852 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	AMER2	Q8N7J2	671 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	LMNTD1	Q8N9Z9	388 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	SCAMP4	Q969E2	229 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	DMRTB1	Q96MA1	342 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CDADC1	Q9BWV3	514 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	SMG9	Q9H0W8	520 aa	Known RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	TPT1P8	Q9HAU6	139 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	DNAJC11	Q9NVH1	559 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	RNF186	Q9NXI6	227 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	FZD4	Q9ULV1	537 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CARD8	Q9Y2G2	431 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	PCDHGB6	Q9Y5F9	930 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	KCNK5	O95279	499 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	HTR3A	P46098	478 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	PRKCD	Q05655	676 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CDK10	Q15131	360 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	CMTM7	Q96FZ5	175 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	DEPDC7	Q96QD5	511 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	PCDH10	Q9P2E7	1040 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	RNF6	Q9Y252	685 aa		13.97	□□□□□ -0.17
SMTN-223	ENST00000619644	SAP18	O00422	153 aa	Known RBP	13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	SUV39H1	O43463	412 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	MED26	O95402	600 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	AMD1	P17707	334 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	POU1F1	P28069	291 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	GZMM	P51124	257 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	CAP1	Q01518	475 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	DMC1	Q14565	340 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	SNAP47	Q5SQN1	464 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	LRIF1	Q5T3J3	769 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	DCAF4L2	Q8NA75	395 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	RNF167	Q9H6Y7	350 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	CWH43	Q9H720	699 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	ZDHHC3	Q9NYG2	299 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	HSPE1-MOB4	S4R3N1	261 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	MGAT4D	A6NG13	374 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	AP3D1	O14617	1153 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	ALX3	O95076	343 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	CYP2A7	P20853	494 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	NAE1	Q13564	534 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	UGT8	Q16880	541 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	NXNL2	Q5VZ03	156 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	KDM4D	Q6B0I6	523 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	TRAF7	Q6Q0C0	670 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	NPAS4	Q8IUM7	802 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	GALNT12	Q8IXK2	581 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	DNASE1L2	Q92874	299 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	TMEM246	Q9BRR3	403 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	NUAK2	Q9H093	628 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	EHD3	Q9NZN3	535 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	NPAP1	Q9NZP6	1156 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	BTBD3	Q9Y2F9	522 aa		13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	WBP11	Q9Y2W2	641 aa	Known RBP	13.96	□□□□□ -0.17
SMTN-223	ENST00000619644	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	PRAMEF4	O60810	478 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	SELP	P16109	830 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	PRPS1L1	P21108	318 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	AOAH	P28039	575 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	CTSK	P43235	329 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	LMAN2	Q12907	356 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	GPR33	Q49SQ1	333 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	PRAMEF9	Q5VWM5	478 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	FAM180B	Q6P0A1	224 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	ZZZ3	Q8IYH5	903 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	OR4K1	Q8NGD4	311 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	BRD9	Q9H8M2	597 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	CFAP97	Q9P2B7	532 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	SNX8	Q9Y5X2	465 aa		13.96	□□□□□ -0.18
SMTN-223	ENST00000619644	CENPX	A8MT69	81 aa		13.95	□□□□□ -0.18
SMTN-223	ENST00000619644	DNTT	P04053	509 aa		13.95	□□□□□ -0.18
SMTN-223	ENST00000619644	PTPN6	P29350	595 aa		13.95	□□□□□ -0.18
SMTN-223	ENST00000619644	HOXA9	P31269	272 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms