RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PEBP4Q96S96 227 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ORAI2Q96SN7 254 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SOSTQ9BQB4 213 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MXRA8Q9BRK3 442 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MARVELD1Q9BSK0 173 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 WACQ9BTA9 647 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SPATA9Q9BWV2 254 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 LGR4Q9BXB1 951 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 HDHD5Q9BXW7 423 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC19A3Q9BZV2 496 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 UCK2Q9BZX2 261 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SRRQ9GZT4 340 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TASP1Q9H6P5 420 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CATSPERBQ9H7T0 1116 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCSER2Q9H7U1 834 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 NT5DC2Q9H857 520 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 HEXA-AS1Q9H8Q6 139 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP3A43Q9HB55 503 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 DLL4Q9NR61 685 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PCDHB16Q9NRJ7 776 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF275Q9NSD4 429 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 OLA1Q9NTK5 396 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 UCKL1Q9NWZ5 548 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAP3K20Q9NYL2 800 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GGA3Q9NZ52 723 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZIM2Q9NZV7 527 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 FNIP2Q9P278 1114 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 C11orf21Q9P2W6 132 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 EPHA6Q9UF33 1036 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 NUFIP1Q9UHK0 495 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MUTYHQ9UIF7 546 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ING4Q9UNL4 249 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRELID3BQ9Y3B1 194 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 IPPQ9Y573 584 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TNPO3Q9Y5L0 923 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR45Q9Y5Y3 372 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRIP11Q15643 1979 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 IQCMA0A1B0GVH7 501 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM234BA2RU67 622 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 NT5C1B-RDH14C9J2C7 533 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 F8W036 122 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 I3L521 148 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 AGRPO00253 132 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACKR2O00590 384 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 BCKDKO14874 412 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KPNA5O15131 536 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CD3EAPO15446 510 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PLA2G10O15496 165 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SH3BP5O60239 455 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CACNG3O60359 315 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TPST1O60507 370 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 GMDSO60547 372 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HCN1O60741 890 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LDOC1O95751 146 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LRG1P02750 347 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MT-ND2P03891 347 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HMGCRP04035 888 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ALDOCP09972 364 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ERVK-10P10266 1014 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ARP10275 920 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HLA-EP13747 358 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PDGFRAP16234 1089 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HDCP19113 662 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 TNNI1P19237 187 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HK1P19367 917 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 POU3F3P20264 500 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DDCP20711 480 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CAPN3P20807 821 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCNA5P22460 613 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PSMB9P28065 219 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SDC4P31431 198 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 FMO4P31512 558 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SFNP31947 248 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KRT20P35900 424 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PIGAP37287 484 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 LIPAP38571 399 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MTHFRP42898 656 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAGEA2P43356 314 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 KIR2DL3P43628 341 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAP2K4P45985 399 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 BRCC3P46736 316 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZFP36L2P47974 494 aaKnown RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACOT2P49753 483 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLCN5P51795 746 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 JAK3P52333 1124 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DGKQP52824 942 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 HSPA2P54652 639 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 BCAT1P54687 386 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC12A2P55011 1212 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLDN20P56880 219 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 SNX16P57768 344 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 DCDC1P59894 354 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 C1QTNF8P60827 252 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAB10P61026 200 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 RRAS2P62070 204 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 UBE3AQ05086 875 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 POU5F1BQ06416 359 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 PIGFQ07326 219 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDH17Q12864 832 aa3.93□□□□□ -1.78
HMGB1P50-201ENST00000605814 ABRQ12979 859 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms