RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 PPP4R1Q8TF05 950 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 TLCD1Q96CP7 247 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 GBP5Q96PP8 586 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 NTMT1Q9BV86 223 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 DPH1Q9BZG8 443 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 ACTR8Q9H981 624 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 LHX9Q9NQ69 397 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 TXLNGQ9NUQ3 528 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 OXSMQ9NWU1 459 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 DHCR7Q9UBM7 475 aaKnown RBP18.44■□□□□ 0.54
UPF1-209ENST00000600310 ZNF490Q9ULM2 529 aaPredicted RBP18.44■□□□□ 0.54
UPF1-209ENST00000600310 RAXQ9Y2V3 346 aa18.44■□□□□ 0.54
UPF1-209ENST00000600310 SPTBP11277 2137 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 SDK2Q58EX2 2172 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 MED26O95402 600 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 STATHP02808 62 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 CCNYL3P0C7X3 344 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 HNF4AP41235 474 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 ETV4P43268 484 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 NAA20P61599 178 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 CLCQ05315 142 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 ABHD18Q0P651 414 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 PCLAFQ15004 111 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 MED27Q6P2C8 311 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 RPS27LQ71UM5 84 aaKnown RBP18.43■□□□□ 0.54
UPF1-209ENST00000600310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.43■□□□□ 0.54
UPF1-209ENST00000600310 LAS2Q8IYD9 372 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 TRPV3Q8NET8 790 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 OR52B6Q8NGF0 335 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 NT5CQ8TCD5 201 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 UBE2E3Q969T4 207 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 ATP6V1E2Q96A05 226 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 NAF1Q96HR8 494 aaKnown RBP18.43■□□□□ 0.54
UPF1-209ENST00000600310 C10orf90Q96M02 699 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 DPH2Q9BQC3 489 aaPredicted RBP18.43■□□□□ 0.54
UPF1-209ENST00000600310 RHBGQ9H310 441 aa18.43■□□□□ 0.54
UPF1-209ENST00000600310 SEMA4BQ9NPR2 832 aaPredicted RBP18.43■□□□□ 0.54
UPF1-209ENST00000600310 CHD6Q8TD26 2715 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 A0A1B0GX78 115 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 DSCR3O14972 297 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 TM9SF1O15321 606 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 RRP8O43159 456 aaKnown RBP18.42■□□□□ 0.54
UPF1-209ENST00000600310 PRPF4O43172 522 aaKnown RBP eCLIP18.42■□□□□ 0.54
UPF1-209ENST00000600310 CLDN9O95484 217 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 OTCP00480 354 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 SLC35G6P0C7Q6 338 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 ALAS2P22557 587 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 STAT5AP42229 794 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 CCNG1P51959 295 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 TRAF3Q13114 568 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 FAM53BQ14153 422 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 NDUFA9Q16795 377 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 AGBL2Q5U5Z8 902 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 LIPMQ5VYY2 423 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 TMEM214Q6NUQ4 689 aaKnown RBP18.42■□□□□ 0.54
UPF1-209ENST00000600310 TTLL10Q6ZVT0 673 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 C10orf107Q8IVU9 208 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 IL22RA1Q8N6P7 574 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 CREB3L4Q8TEY5 395 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 MR1Q95460 341 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 MOCOSQ96EN8 888 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 PKNOX2Q96KN3 472 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 MACROD1Q9BQ69 325 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 AKIRIN1Q9H9L7 192 aaPredicted RBP18.42■□□□□ 0.54
UPF1-209ENST00000600310 ACSS2Q9NR19 701 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 RNF11Q9Y3C5 154 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 AHCTF1Q8WYP5 2266 aa18.42■□□□□ 0.54
UPF1-209ENST00000600310 PPP6CO00743 305 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 NDUFS4O43181 175 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 KLK10O43240 276 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 TRIM13O60858 407 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 CLEC3AO75596 197 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 MLYCDO95822 493 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 ONECUT2O95948 504 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 SERPINA6P08185 405 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 TSPAN8P19075 237 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 AGXTP21549 392 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 ALDH3A1P30838 453 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 NAGLUP54802 743 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 MAGOHP61326 146 aaKnown RBP18.41■□□□□ 0.54
UPF1-209ENST00000600310 CYP4F2P78329 520 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 DCDP81605 110 aaKnown RBP18.41■□□□□ 0.54
UPF1-209ENST00000600310 RGS1Q08116 209 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 COL9A2Q14055 689 aaPredicted RBP18.41■□□□□ 0.54
UPF1-209ENST00000600310 C1orf189Q5VU69 101 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 VN1R5Q7Z5H4 357 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 MILR1Q7Z6M3 343 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 MYLK4Q86YV6 388 aaPredicted RBP18.41■□□□□ 0.54
UPF1-209ENST00000600310 CCNYL1Q8N7R7 359 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 KCT2Q8NC54 265 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 OR7G3Q8NG95 312 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 TRPC4APQ8TEL6 797 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 ARL8AQ96BM9 186 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 MVB12AQ96EY5 273 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 MAGEB10Q96LZ2 347 aaPredicted RBP18.41■□□□□ 0.54
UPF1-209ENST00000600310 CDK15Q96Q40 435 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 CHST8Q9H2A9 424 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 GSTO2Q9H4Y5 243 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 SSUH2Q9Y2M2 353 aa18.41■□□□□ 0.54
UPF1-209ENST00000600310 TSC22D4Q9Y3Q8 395 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms