RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 ZFP36L2P47974 494 aaKnown RBP12.93□□□□□ -0.34
HOMER3-212ENST00000600077 EMP3P54852 163 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 CRADDP78560 199 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 GPS1Q13098 491 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 BRD3Q15059 726 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 TMED2Q15363 201 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 SLC25A35Q3KQZ1 300 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 RNFT1Q5M7Z0 435 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 FCRLBQ6BAA4 426 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 ARHGAP11AQ6P4F7 1023 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 UNC5DQ6UXZ4 953 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 ZNF534Q76KX8 674 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 CRLF3Q8IUI8 442 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 MPP5Q8N3R9 675 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 OR10Q1Q8NGQ4 319 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 FAM222BQ8WU58 562 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
HOMER3-212ENST00000600077 BDH2Q9BUT1 245 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 CHRAC1Q9NRG0 131 aa12.93□□□□□ -0.34
HOMER3-212ENST00000600077 C19orf25Q9UFG5 118 aaPredicted RBP12.93□□□□□ -0.34
HOMER3-212ENST00000600077 ZC3H7BQ9UGR2 993 aaKnown RBP12.93□□□□□ -0.34
HOMER3-212ENST00000600077 GOLGA6L10A0A0M3HER8 536 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 GABRR3A8MPY1 467 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 CD3EAPO15446 510 aaKnown RBP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 NME2P1O60361 137 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 OR1I1O60431 355 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 SLC25A12O75746 678 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 NEURL1O76050 574 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 MED26O95402 600 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 KRT14P02533 472 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 CYC1P08574 325 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 NME2P22392 152 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 MGAT1P26572 445 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 ACADLP28330 430 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 TERF1P54274 439 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 DCAF7P61962 342 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 PCBP2Q15366 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 SF1Q15637 639 aaKnown RBP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 TRIP13Q15645 432 aaPredicted RBP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 LRRC8BQ6P9F7 803 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 PHC2Q8IXK0 858 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 SLC35F6Q8N357 371 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 RASGEF1CQ8N431 466 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 SLC5A8Q8N695 610 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 OR5M3Q8NGP4 307 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 GSDMBQ8TAX9 411 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 TMEM158Q8WZ71 300 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 PHF3Q92576 2039 aaKnown RBP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 DMRT3Q9NQL9 472 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 TRMT1Q9NXH9 659 aaKnown RBP12.92□□□□□ -0.34
HOMER3-212ENST00000600077 CRIM1Q9NZV1 1036 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 SAMD15Q9P1V8 674 aa12.92□□□□□ -0.34
HOMER3-212ENST00000600077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 SLC5A10A0PJK1 596 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 H7C1Q1 480 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PRMT5O14744 637 aaPredicted RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PFDN6O15212 129 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 CDC40O60508 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 NDUFS3O75489 264 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 SEC24DO94855 1032 aaPredicted RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 RPN2P04844 631 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 APOA4P06727 396 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 ANXA5P08758 320 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 ERVK-10P10266 1014 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PAMP19021 973 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 TFEBP19484 476 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PKLRP30613 574 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 CSE1LP55060 971 aaKnown RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 SEMA3AQ14563 771 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 EXT1Q16394 746 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 FLYWCH1Q4VC44 716 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PTRHD1Q6GMV3 140 aaKnown RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 CASC4Q6P4E1 433 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 CCDC137Q6PK04 289 aaKnown RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PAOXQ6QHF9 649 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 CPEB2Q7Z5Q1 589 aaKnown RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 LGI4Q8N135 537 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 RPRMLQ8N4K4 120 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 M1APQ8TC57 530 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 ASZ1Q8WWH4 475 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 MS4A14Q96JA4 679 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PANX3Q96QZ0 392 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 TREX1Q9NSU2 369 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 SYBUQ9NX95 663 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 MARCH4Q9P2E8 410 aaPredicted RBP12.91□□□□□ -0.34
HOMER3-212ENST00000600077 PLAGL1Q9UM63 463 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
HOMER3-212ENST00000600077 CES2O00748 559 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 CRLF1O75462 422 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
HOMER3-212ENST00000600077 CD9P21926 228 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 NMBRP28336 390 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 SLC26A3P40879 764 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 TAS2R50P59544 299 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 HSPA14Q0VDF9 509 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 KCNJ11Q14654 390 aa12.9□□□□□ -0.34
HOMER3-212ENST00000600077 DNAJC21Q5F1R6 531 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms