RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 BTBD3Q9Y2F9 522 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 TSC22D4Q9Y3Q8 395 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 PCDHGA8Q9Y5G5 932 aa18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 TCF20Q9UGU0 1960 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-209ENST00000589838 MUC22E2RYF6 1773 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 C1orf226A1L170 272 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 PIPSLA2A3N6 862 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 HEPACAM2A8MVW5 462 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 YY2O15391 372 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 DPM1O60762 260 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 FKBP9O95302 570 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 ZNF8P17098 575 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 FPR1P21462 350 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 PRKACGP22612 351 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 IGFBP5P24593 272 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 ACADLP28330 430 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 TAP2Q03519 686 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 GAB4Q2WGN9 574 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 ZNF691Q5VV52 312 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 CHDHQ8NE62 594 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 GOT1L1Q8NHS2 421 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 RAD51AP1Q96B01 352 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 HDAC8Q9BY41 377 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 ADPRHL2Q9NX46 363 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 OBP2AQ9NY56 170 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 TMEFF2Q9UIK5 374 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 U3KQV3 271 aa18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 KIAA0100Q14667 2235 aaKnown RBP18.44■□□□□ 0.54
PRKCSH-209ENST00000589838 SH3BGRLO75368 114 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 KELP23276 732 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 RGNQ15493 299 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 NEDD8Q15843 81 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ADNP2Q6IQ32 1131 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 LRRC56Q8IYG6 542 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 CHPFQ8IZ52 775 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 MTERF3Q96E29 417 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 HSH2DQ96JZ2 352 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ZFYVE19Q96K21 471 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 EBF1Q9UH73 591 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 CDH7Q9ULB5 785 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 NUP214P35658 2090 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 MYO1GB0I1T2 1018 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 GSTM2P28161 218 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 PCGF2P35227 344 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 MESP2Q0VG99 397 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 PPP1R8Q12972 351 aaKnown RBP18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 GPR107Q5VW38 600 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 FAM46CQ5VWP2 391 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 CRTC3Q6UUV7 619 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 LCTLQ6UWM7 567 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 TMC5Q6UXY8 1006 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ADAMTSL4Q6UY14 1074 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 COMMD6Q7Z4G1 85 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ZNF547Q8IVP9 402 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 KRT78Q8N1N4 520 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 C12orf76Q8N812 135 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 C11orf65Q8NCR3 313 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 PIK3C3Q8NEB9 887 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 OR10Q1Q8NGQ4 319 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 SAMD11Q96NU1 681 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ZDHHC5Q9C0B5 715 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 MYNNQ9NPC7 610 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 FAF1Q9UNN5 650 aaPredicted RBP18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ABCG2Q9UNQ0 655 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 ERVK-11Q9UQG0 969 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 HSPE1-MOB4S4R3N1 261 aa18.43■□□□□ 0.54
PRKCSH-209ENST00000589838 TBC1D3BA6NDS4 549 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 BCKDKO14874 412 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 SUV39H1O43463 412 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 RPN2P04844 631 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 FSHRP23945 695 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 PTX3P26022 381 aaPredicted RBP18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 PIGAP37287 484 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 CD47Q08722 323 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 GPM6BQ13491 265 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 METTL4Q8N3J2 472 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 OR13F1Q8NGS4 319 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.42■□□□□ 0.543e-14■□□□□ 10.9
PRKCSH-209ENST00000589838 CHST8Q9H2A9 424 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 RAD21L1Q9H4I0 556 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 REEP1Q9H902 201 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 CDC14AQ9UNH5 594 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 SNX5Q9Y5X3 404 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 MYO7AQ13402 2215 aa18.42■□□□□ 0.54
PRKCSH-209ENST00000589838 PLK4O00444 970 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 CCDC159P0C7I6 412 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 HSD17B2P37059 387 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 TMBIM6P55061 237 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 ISL1P61371 349 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 CAMK2GQ13555 558 aaPredicted RBP18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 NFE2L1Q14494 772 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 CYP2A13Q16696 494 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 MEP1AQ16819 746 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 C11orf91Q3C1V1 193 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 PRAMEF14Q5SWL7 426 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 PRAMEF13Q5VWM6 474 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 DHRS4L2Q6PKH6 230 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 SPRED2Q7Z698 418 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 PDZD3Q86UT5 571 aa18.41■□□□□ 0.54
PRKCSH-209ENST00000589838 AMZ2Q86W34 360 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms