RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 P2RX5Q93086 422 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 BSCL2Q96G97 398 aaPredicted RBP3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 SPATA17Q96L03 361 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 NSMCE3Q96MG7 304 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 NEDD4LQ96PU5 975 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 NDNQ99608 321 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 TDRD1Q9BXT4 1180 aaKnown RBP3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 SDCBP2Q9H190 292 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 ACTL8Q9H568 366 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 LMAN1LQ9HAT1 526 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 NSG2Q9Y328 171 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 CSNK1G3Q9Y6M4 447 aa3.22□□□□□ -1.89
RPRD1A-203ENST00000585879 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 PRSS46E5RG02 174 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 FCGR3BO75015 233 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 IGHEP01854 428 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 RPN1P04843 607 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 VIMP08670 466 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 EEF2P13639 858 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 PSMB4P28070 264 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 SSTR1P30872 391 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 TSFMP43897 325 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 MFAP3P55082 362 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 CLDN17P56750 224 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 CSNK2BP67870 215 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 SCN1BQ07699 218 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 PTK6Q13882 451 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 MTF1Q14872 753 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 FAM174BQ3ZCQ3 159 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 GLIPR1L2Q4G1C9 344 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 FAM133BQ5BKY9 247 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 WLSQ5T9L3 541 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 ARMC3Q5W041 872 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 SPATA19Q7Z5L4 167 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 DZIP1Q86YF9 867 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 RCOR2Q8IZ40 523 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 C9orf43Q8TAL5 461 aaPredicted RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 RBM41Q96IZ5 413 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 UPF3AQ9H1J1 476 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 TEX10Q9NXF1 929 aaPredicted RBP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 SELENOKQ9Y6D0 94 aa3.21□□□□□ -1.9
RPRD1A-203ENST00000585879 H0YAE9 185 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 RTCAO00442 366 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 FLRT2O43155 660 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 VTNP04004 478 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 ZSCAN5DPP0CG00 497 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 IFNAR1P17181 557 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 PRKACGP22612 351 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 ELAVL4P26378 380 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 OR3A2P47893 321 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 GMPSP49915 693 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 IL10RBQ08334 325 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 SGCGQ13326 291 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 MPP7Q5T2T1 576 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 FAM166AQ6J272 317 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 KIF6Q6ZMV9 814 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 GALNTL5Q7Z4T8 443 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 LRRTM1Q86UE6 522 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 CCDC60Q8IWA6 550 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 C11orf53Q8IXP5 236 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 TIGD4Q8IY51 512 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 TCEANCQ8N8B7 351 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 GBP7Q8N8V2 638 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 AQP11Q8NBQ7 271 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 OCC1Q8TAD7 63 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 SLC26A7Q8TE54 656 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 RIT1Q92963 219 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 AK8Q96MA6 479 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 EGLN3Q9H6Z9 239 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 ZCCHC17Q9NP64 241 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 TBC1D13Q9NVG8 400 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 PRDM4Q9UKN5 801 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 RUVBL2Q9Y230 463 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 HEG1Q9ULI3 1381 aa3.2□□□□□ -1.9
RPRD1A-203ENST00000585879 MTMR11A4FU01 709 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 SLC1A7O00341 560 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 KRT33AO76009 404 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 SUPT20HL2P0C7V6 817 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 TRIM49P0CI25 452 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 TRIM49CP0CI26 452 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 HLA-FP30511 346 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 DUTP33316 252 aaKnown RBP3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 SOX3P41225 446 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 NAGLUP54802 743 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 IRX4P78413 519 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 RBP5P82980 135 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 FOLH1Q04609 750 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 SULT2A1Q06520 285 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 PEX6Q13608 980 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 PTPN14Q15678 1187 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 FGD3Q5JSP0 725 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 FUT10Q6P4F1 479 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 Q6ZR54 194 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 GPC2Q8N158 579 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 FAM89BQ8N5H3 189 aa3.19□□□□□ -1.9
RPRD1A-203ENST00000585879 GRK7Q8WTQ7 553 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms