RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 ALPPL2P10696 532 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 AMD1P17707 334 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CD22P20273 847 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CYP2A7P20853 494 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 AOAHP28039 575 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 PDHA2P29803 388 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 SOX3P41225 446 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 FKBP1BP68106 108 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 MRPS15P82914 257 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ST3GAL4Q11206 333 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ILF2Q12905 390 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 HIST2H2ACQ16777 129 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 TRIM71Q2Q1W2 868 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ATG9BQ674R7 924 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 RAB8BQ92930 207 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 TMEM169Q96HH4 297 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CCDC115Q96NT0 180 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 IL17FQ96PD4 163 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 OR5M11Q96RB7 305 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CLSTN3Q9BQT9 956 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 CORO1BQ9BR76 489 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 IL1RAPQ9NPH3 570 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ADPRHL2Q9NX46 363 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 MS4A12Q9NXJ0 267 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 TRPS1Q9UHF7 1281 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 RPS6KA6Q9UK32 745 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 ZNF232Q9UNY5 417 aa8.65□□□□□ -1.02
HDGFL3-206ENST00000568294 WBP4O75554 376 aaKnown RBP8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 RETP07949 1114 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 CCDC159P0C7I6 412 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF404Q494X3 552 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 DEF8Q6ZN54 512 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 PTOV1Q86YD1 416 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 GPR65Q8IYL9 337 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 MFSD4AQ8N468 514 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 DTX3Q8N9I9 347 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 PJA1Q8NG27 643 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 ITPAQ9BY32 194 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 NUAK2Q9H093 628 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 TM9SF3Q9HD45 589 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 ABCB9Q9NP78 766 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 TOR4AQ9NXH8 423 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 VPS29Q9UBQ0 182 aa8.65□□□□□ -1.03
HDGFL3-206ENST00000568294 A0A1W2PQ45 241 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 A0A1W2PQY0 241 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 GABRR3A8MPY1 467 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 WNT9AO14904 365 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PCDH17O14917 1159 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 SLC16A8O95907 504 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 SSTR4P31391 388 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CTSCP53634 463 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ATAD3BQ5T9A4 648 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 DEPDC1Q5TB30 811 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 IRAK1BP1Q5VVH5 260 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 USP45Q70EL2 814 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TRMT11Q7Z4G4 463 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 AKAP14Q86UN6 197 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 THOC6Q86W42 341 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 RNF130Q86XS8 419 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TRAPPC5Q8IUR0 188 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF675Q8TD23 568 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PLD4Q96BZ4 506 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CCM2Q9BSQ5 444 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 RIOK2Q9BVS4 552 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF556Q9HAH1 456 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 SNTG1Q9NSN8 517 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 LSM7Q9UK45 103 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 FAM32AQ9Y421 112 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PCDHGA4Q9Y5G9 962 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TMEM221A6NGB7 291 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TTC34A8MYJ7 566 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 AP3D1O14617 1153 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ASNA1O43681 348 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 AOC2O75106 756 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 FHP07954 510 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 HLA-EP13747 358 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 MAPK1P28482 360 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 RECQLP46063 649 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 NRIP1P48552 1158 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 RNF144AP50876 292 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 PRKAG1P54619 331 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 GABARAPL2P60520 117 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 RFX4Q33E94 735 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF697Q5TEC3 545 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 DDX53Q86TM3 631 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ARMC8Q8IUR7 673 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CHPFQ8IZ52 775 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 SLC34A3Q8N130 599 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 IQCF1Q8N6M8 205 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF740Q8NDX6 193 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 OR2AP1Q8NGE2 309 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 DYNC2LI1Q8TCX1 351 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 CD99L2Q8TCZ2 262 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TMEM159Q96B96 161 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 SLC35A5Q9BS91 424 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 HTATIP2Q9BUP3 242 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 MROQ9BYG7 248 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 TIGARQ9NQ88 270 aa8.64□□□□□ -1.03
HDGFL3-206ENST00000568294 ZDHHC3Q9NYG2 299 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms