RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 HYKKA2RU49 373 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 URADA6NGE7 173 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 TCP11X1B4DZS4 312 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 C9J4A7 227 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 UBXN8O00124 270 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 TAPBPO15533 448 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 HCRTR1O43613 425 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 ALBP02768 609 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 C1GALT1C1LP0DN25 315 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 CASP2P42575 452 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 KCNC1P48547 511 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 HSPA7P48741 367 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 VSX2P58304 361 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 RPS15P62841 145 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 YBX1P67809 324 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 DCDP81605 110 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 REEP5Q00765 189 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 CCDC153Q494R4 210 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 ZNF385CQ66K41 422 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 TMPRSS11BQ86T26 416 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC22A9Q8IVM8 553 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 MFSD9Q8NBP5 474 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 EXT2Q93063 718 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 NACC2Q96BF6 587 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 PTCD3Q96EY7 689 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 NAF1Q96HR8 494 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 SCYL1Q96KG9 808 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 GBP5Q96PP8 586 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 SPRTNQ9H040 489 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 FAM107BQ9H098 131 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC17A7Q9P2U7 560 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 ZFP69BQ9UJL9 534 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 MID2Q9UJV3 735 aa13.35□□□□□ -0.27
PKNOX1-209ENST00000560448 IGF2RP11717 2491 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 ZNF891A8MT65 544 aaPredicted RBP13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 K7ENP7 123 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 TERTO14746 1132 aaKnown RBP13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 CCNT2O60583 730 aaKnown RBP13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 TCN2P20062 427 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 SERPINB1P30740 379 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 DLSTP36957 453 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 GDF5P43026 501 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 VAC14Q08AM6 782 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 TGIF1Q15583 401 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 PFKFB4Q16877 469 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 C10orf62Q5T681 223 aaPredicted RBP13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 FRMPD2BQ6IN97 320 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 SLCO4C1Q6ZQN7 724 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 CPLX4Q7Z7G2 160 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 ASPGQ86U10 573 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 HOMEZQ8IX15 550 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 SLC38A9Q8NBW4 561 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 MR1Q95460 341 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 TM4SF19Q96DZ7 209 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 ADGRE2Q9UHX3 823 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 NXT1Q9UKK6 140 aaKnown RBP13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 ANGPTL3Q9Y5C1 460 aa13.34□□□□□ -0.27
PKNOX1-209ENST00000560448 MDC1Q14676 2089 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 LOC105369274A0A096LPK9 316 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 LOC102723532A0A0G2JNH3 316 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 H0YIG0 161 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 EBAG9O00559 213 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 EIF2S1P05198 315 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 CRHR1P34998 444 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 HNF4AP41235 474 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SCTRP47872 440 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 RGS1Q08116 209 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 DNASE1L3Q13609 305 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 HIST2H2ACQ16777 129 aaPredicted RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 CATSPEREQ5SY80 951 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 HHATQ5VTY9 493 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 LIPJQ5W064 366 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 HIST2H2AA3Q6FI13 130 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 C6orf89Q6UWU4 347 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 TTLL10Q6ZVT0 673 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SYVN1Q86TM6 617 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 OR4N4Q8N0Y3 316 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SNX31Q8N9S9 440 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 RDH11Q8TC12 318 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 NT5CQ8TCD5 201 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SLC13A3Q8WWT9 602 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 CATSPER2Q96P56 530 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 DRC3Q9H069 523 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SLC26A1Q9H2B4 701 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 C12orf65Q9H3J6 166 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 CLK4Q9HAZ1 481 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 CPSF2Q9P2I0 782 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 CROTQ9UKG9 612 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SH2B3Q9UQQ2 575 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 STK38LQ9Y2H1 464 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 TSC22D4Q9Y3Q8 395 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 SLC22A7Q9Y694 548 aa13.33□□□□□ -0.28
PKNOX1-209ENST00000560448 LOC101059948A0A1B0GTJ6 334 aa13.32□□□□□ -0.28
PKNOX1-209ENST00000560448 TK2O00142 265 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms