RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SACM1LQ9NTJ5 587 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 ZNF282Q9UDV7 671 aaPredicted RBP13.25□□□□□ -0.29
VPS33A-208ENST00000543633 PCDHB7Q9Y5E2 793 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 LOC110117498-PIK3R3F6TDL0 507 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 DYRK3O43781 588 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 RRM2P31350 389 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 B4GALNT1Q00973 533 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 CHIT1Q13231 466 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 SYT16Q17RD7 645 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 ZXDCQ2QGD7 858 aaPredicted RBP13.25□□□□□ -0.29
VPS33A-208ENST00000543633 GALNT6Q8NCL4 622 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 GPR26Q8NDV2 337 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 OR4C15Q8NGM1 316 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 WDR20Q8TBZ3 569 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 PIK3R3Q92569 461 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 GGHQ92820 318 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 WBP2Q969T9 261 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 CCDC32Q9BV29 185 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 CDADC1Q9BWV3 514 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 CNOT2Q9NZN8 540 aaKnown RBP13.25□□□□□ -0.29
VPS33A-208ENST00000543633 FZD4Q9ULV1 537 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 TNFRSF11BO00300 401 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 DSCR3O14972 297 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 TBX1O43435 398 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 NBNO60934 754 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 GALTP07902 379 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 SRPRAP08240 638 aaKnown RBP13.24□□□□□ -0.29
VPS33A-208ENST00000543633 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 ITGA2P17301 1181 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 GABRB1P18505 474 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 HNF4AP41235 474 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 PNLIPRP1P54315 467 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 UGT2B15P54855 530 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 SELENOWP63302 87 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 ACSM2AQ08AH3 577 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 RBBP4Q09028 425 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 PPIGQ13427 754 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS33A-208ENST00000543633 RGNQ15493 299 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 PRSS36Q5K4E3 855 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 C10orf62Q5T681 223 aaPredicted RBP13.24□□□□□ -0.29
VPS33A-208ENST00000543633 ACSM2BQ68CK6 577 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
VPS33A-208ENST00000543633 Q6ZNB5 142 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 USP45Q70EL2 814 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 ZNF605Q86T29 641 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 NLRP8Q86W28 1048 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 NPAS3Q8IXF0 933 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 OR10G2Q8NGC3 310 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 TPD52L3Q96J77 140 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 MYOCQ99972 504 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 RNF38Q9H0F5 515 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 POLE4Q9NR33 117 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 SLCO3A1Q9UIG8 710 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 PNMA8BQ9ULN7 279 aaPredicted RBP13.24□□□□□ -0.29
VPS33A-208ENST00000543633 VPS4AQ9UN37 437 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 CFL2Q9Y281 166 aa13.24□□□□□ -0.29
VPS33A-208ENST00000543633 SH3D21A4FU49 640 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 ARRDC5A6NEK1 342 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 EFCAB10A6NFE3 127 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 H0YIV9 168 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 MPZL2O60487 215 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 PRAMEF4O60810 478 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 KCNK2O95069 426 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 OXSR1O95747 527 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-208ENST00000543633 DLGAP3O95886 979 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 SOX6P35712 828 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 SLC19A1P41440 591 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 ALDH9A1P49189 494 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 CRYBA2P53672 197 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 IRF8Q02556 426 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 SLC13A2Q13183 592 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 LRIT3Q3SXY7 679 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 PRAMEF9Q5VWM5 478 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 GRHL2Q6ISB3 625 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 C19orf48Q6RUI8 117 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 CRTC1Q6UUV9 634 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 PARP16Q8N5Y8 322 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 SLC43A3Q8NBI5 491 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 COQ8BQ96D53 544 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 ECHDC3Q96DC8 303 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 MCCC1Q96RQ3 725 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-208ENST00000543633 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 DPH2Q9BQC3 489 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-208ENST00000543633 EBPLQ9BY08 206 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 C6orf62Q9GZU0 229 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-208ENST00000543633 HOXD1Q9GZZ0 328 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 RACGAP1Q9H0H5 632 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 WBP1LQ9NX94 342 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.23□□□□□ -0.29
VPS33A-208ENST00000543633 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 NPIPB15A6NHN6 443 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-208ENST00000543633 TMEM229AB2RXF0 380 aa13.23□□□□□ -0.29
VPS33A-208ENST00000543633 K7ERQ8 282 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms