RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 CTSKP43235 329 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 ARHGDIAP52565 204 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 BCL2L1Q07817 233 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 IER5LQ5T953 404 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 TXNDC8Q6A555 127 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 LINC00299Q6ZSB3 139 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 SVOPQ8N4V2 548 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 ARL14EPQ8N8R7 260 aaPredicted RBP13.58□□□□□ -0.23
CLPB-209ENST00000538039 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 PLD4Q96BZ4 506 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 OR4K3Q96R72 315 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 GABARAPL3Q9BY60 117 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 ACSL6Q9UKU0 697 aa13.58□□□□□ -0.23
CLPB-209ENST00000538039 TMEM88BA6NKF7 163 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 PCDH17O14917 1159 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 EPN2O95208 641 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 CDK1P06493 297 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 IGFBP1P08833 259 aaPredicted RBP13.58□□□□□ -0.24
CLPB-209ENST00000538039 ETFAP13804 333 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 PRPH2P23942 346 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 SPAM1P38567 509 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 ZMAT1Q5H9K5 638 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.58□□□□□ -0.24
CLPB-209ENST00000538039 MINDY2Q8NBR6 621 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 WDR20Q8TBZ3 569 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 KCNS3Q9BQ31 491 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 SLC12A9Q9BXP2 914 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 ROGDIQ9GZN7 287 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 NXF2Q9GZY0 626 aaKnown RBP13.58□□□□□ -0.24
CLPB-209ENST00000538039 ERVK13-1Q9NX77 482 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 RHCGQ9UBD6 479 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 PCDHGA3Q9Y5H0 932 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 SNPHO15079 494 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 SGTAO43765 313 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 GGT2P36268 569 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 RGNQ15493 299 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 CCBE1Q6UXH8 406 aaPredicted RBP13.58□□□□□ -0.24
CLPB-209ENST00000538039 SCAMP4Q969E2 229 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 TP53INP1Q96A56 240 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 NEDD4LQ96PU5 975 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 TP63Q9H3D4 680 aaPredicted RBP13.58□□□□□ -0.24
CLPB-209ENST00000538039 TMEM161AQ9NX61 479 aa13.58□□□□□ -0.24
CLPB-209ENST00000538039 PLXND1Q9Y4D7 1925 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 CLCA1A8K7I4 914 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 RECKO95980 971 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
CLPB-209ENST00000538039 ALOX12P18054 663 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 SERPINB1P30740 379 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 CASP3P42574 277 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 ACLYP53396 1101 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 MC1RQ01726 317 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 ST3GAL4Q11206 333 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 PPIGQ13427 754 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLPB-209ENST00000538039 EXOC3L2Q2M3D2 409 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 GPR156Q8NFN8 814 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 SPPL2AQ8TCT8 520 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.242e-6■■■■□ 22.4
CLPB-209ENST00000538039 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 FCRL1Q96LA6 429 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 CCM2Q9BSQ5 444 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 ZNF334Q9HCZ1 680 aaPredicted RBP13.57□□□□□ -0.24
CLPB-209ENST00000538039 KCTD5Q9NXV2 234 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 PCDHB11Q9Y5F2 797 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 PCM1Q15154 2024 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 OPRD1P41143 372 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 TRPC1P48995 793 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 CDH18Q13634 790 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 LACC1Q8IV20 430 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 FAM217AQ8IXS0 508 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 MMP21Q8N119 569 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 IL17RDQ8NFM7 739 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 OR4C15Q8NGM1 316 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 TRMT61AQ96FX7 289 aaKnown RBP13.57□□□□□ -0.24
CLPB-209ENST00000538039 MMP27Q9H306 513 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 SH2B3Q9UQQ2 575 aa13.57□□□□□ -0.24
CLPB-209ENST00000538039 CHD7Q9P2D1 2997 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 A8MV72 311 aaPredicted RBP13.56□□□□□ -0.24
CLPB-209ENST00000538039 H3BM21 787 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 PRPS1L1P21108 318 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 UGT2B10P36537 528 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 PIK3CBP42338 1070 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 NSG1P42857 185 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 RGS6P49758 472 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 CDH12P55289 794 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 NKX3-2P78367 333 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 GGTA1PQ4G0N0 100 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 MFSD14CQ5VZR4 134 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 P3H2Q8IVL5 708 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 C1orf52Q8N6N3 182 aaKnown RBP13.56□□□□□ -0.24
CLPB-209ENST00000538039 B3GNT7Q8NFL0 401 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 UTP15Q8TED0 518 aaKnown RBP13.56□□□□□ -0.24
CLPB-209ENST00000538039 CAPSLQ8WWF8 208 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 SP140LQ9H930 580 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 TRIM39Q9HCM9 518 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 MS4A12Q9NXJ0 267 aa13.56□□□□□ -0.24
CLPB-209ENST00000538039 RPS6KA6Q9UK32 745 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms