RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	SAP25	Q8TEE9	199 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	HAS2	Q92819	552 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	WBP2	Q969T9	261 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RTP4	Q96DX8	246 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC47A1	Q96FL8	570 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RBM41	Q96IZ5	413 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SORCS2	Q96PQ0	1159 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLITRK6	Q9H5Y7	841 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RPF1	Q9H9Y2	349 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RAVER2	Q9HCJ3	691 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TMOD3	Q9NYL9	352 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PLEKHA6	Q9Y2H5	1048 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SH3GLB1	Q9Y371	365 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TMED7	Q9Y3B3	224 aa		4.58	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZNF521	Q96K83	1311 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SAA2-SAA4	A0A096LPE2	208 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ANTXRL	A6NF34	631 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CD8B2	A6NJW9	211 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KPNA7	A9QM74	516 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C2CD4D	B7Z1M9	353 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006		H3BMM5	538 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	AKR7A3	O95154	331 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IGHD	P01880	384 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CXCL10	P02778	98 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RAF1	P04049	648 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NUDT17	P0C025	328 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IGHV4-31	P0DP07	118 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KRT3	P12035	628 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GP1BB	P13224	206 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KRT5	P13647	590 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MSH3	P20585	1137 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	EFNA1	P20827	205 aa	Predicted RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	LHCGR	P22888	699 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ALDH4A1	P30038	563 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CCND2	P30279	289 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DUT	P33316	252 aa	Known RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	HOXA1	P49639	335 aa	Predicted RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CLDN17	P56750	224 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	INHBE	P58166	350 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IRX4	P78413	519 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KCNJ10	P78508	379 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PRKCE	Q02156	737 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GK2	Q14410	553 aa	Predicted RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	HERC3	Q15034	1050 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	EPC2	Q52LR7	807 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TEX35	Q5T0J7	233 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RAET1G	Q6H3X3	334 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	UNQ6126/PRO20091	Q6UXV3	157 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MARK2	Q7KZI7	788 aa	Known RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	LCA5	Q86VQ0	697 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	STH	Q8IWL8	128 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	LRTM2	Q8N967	370 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZNF540	Q8NDQ6	660 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OLIG1	Q8TAK6	271 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	METTL21A	Q8WXB1	218 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C14orf79	Q96F83	325 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	BTBD9	Q96Q07	612 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CTAGE1	Q96RT6	745 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MYCBP	Q99417	103 aa	Predicted RBP	4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	WWTR1	Q9GZV5	400 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RAB17	Q9H0T7	212 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZDHHC6	Q9H6R6	413 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ECHDC1	Q9NTX5	307 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SOHLH2	Q9NX45	425 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NDUFA13	Q9P0J0	144 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NCKAP1	Q9Y2A7	1128 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006		R4GN57	208 aa		4.57	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GREB1L	Q9C091	1923 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	UBE4B	O95155	1302 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	AKAP8	O43823	692 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	PEX11A	O75192	247 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CHRNG	P07510	517 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	FGF5	P12034	268 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	CD59	P13987	128 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DARS	P14868	501 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SRD5A2	P31213	254 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ACAA2	P42765	397 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NSF	P46459	744 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	NR2C2	P49116	596 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	DPYS	Q14117	519 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	KRT31	Q15323	416 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	GPR33	Q49SQ1	333 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	C20orf194	Q5TEA3	1177 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IRGC	Q6NXR0	463 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZNF852	Q6ZMS4	543 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	MCM10	Q7L590	875 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SYVN1	Q86TM6	617 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	RCOR2	Q8IZ40	523 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	IQCF1	Q8N6M8	205 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SIDT2	Q8NBJ9	832 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SLC24A4	Q8NFF2	622 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR4C15	Q8NGM1	316 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	OR13C3	Q8NGS6	347 aa		4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	SMG7	Q92540	1137 aa	Known RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	TRIM44	Q96DX7	344 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-222	ENST00000514006	ALG14	Q96F25	216 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms