RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 F10P00742 488 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CRPP02741 224 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 IL6RP08887 468 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 CTAGE8P0CG41 777 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HKR1P10072 659 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PFKFB1P16118 471 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CTPS1P17812 591 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HIST1H1TP22492 207 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 GLRA1P23415 457 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SERPINA4P29622 427 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HTR1FP30939 366 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GRK5P34947 590 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CSNK1DP48730 415 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HCAR3P49019 387 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PRIM2P49643 509 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PRKXP51817 358 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GTF2A2P52657 109 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MFAP4P55083 255 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CRYZQ08257 329 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 RBL2Q08999 1139 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SLC10A7Q0GE19 358 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HERC3Q15034 1050 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 FOXD4L6Q3SYB3 417 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 PPP6R3Q5H9R7 873 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 TREML2Q5T2D2 321 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PIK3R6Q5UE93 754 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 LCN1P1Q5VSP4 162 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 LCN12Q6JVE5 192 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 RGS7BPQ6MZT1 257 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 APOOLQ6UXV4 268 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 FOXD4L3Q6VB84 417 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 OVCH2Q7RTZ1 564 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 LRRC70Q7Z2Q7 622 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CDC20BQ86Y33 519 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZNF584Q8IVC4 421 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CTAGE4Q8IX94 777 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CMIPQ8IY22 773 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 LRRC34Q8IZ02 419 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GOLM1Q8NBJ4 401 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 OR11H6Q8NGC7 330 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 OR2K2Q8NGT1 345 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 FAM213BQ8TBF2 198 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MYCBPAPQ8TBZ2 947 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HCAR2Q8TDS4 363 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 NOC3LQ8WTT2 800 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 IP6K1Q92551 441 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TAF4BQ92750 862 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MR1Q95460 341 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ADIPOR1Q96A54 375 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZUFSPQ96AP4 578 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SNF8Q96H20 258 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 FANCD2OSQ96PS1 177 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TAAR6Q96RI8 345 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZBP1Q9H171 429 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TFB2MQ9H5Q4 396 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 C1orf123Q9NWV4 160 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 DONSONQ9NYP3 566 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 NLGN3Q9NZ94 848 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 STX18Q9P2W9 335 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZNF212Q9UDV6 495 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HSPB8Q9UJY1 196 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 DTX4Q9Y2E6 619 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GCC2Q8IWJ2 1684 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 IQANK1A0A1B0GTG1 560 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 C1orf226A1L170 272 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 UPK3BL1B0FP48 263 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 B4DEV8 164 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 UPK3BL2E5RIL1 263 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 H3BMH7 237 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 I6L893 689 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 K7EMT4 169 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GSTA4O15217 222 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 EIF3DO15371 548 aaKnown RBP eCLIP1.37□□□□□ -2.19
XRN1-214ENST00000498077 PSMD3O43242 534 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PLA2G6O60733 806 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TULP3O75386 442 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PPBPP02775 128 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TACSTD2P09758 323 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 C1QTNF9P0C862 333 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 CDH1P12830 882 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SRMP19623 302 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 DNAJB1P25685 340 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PSMA1P25786 263 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 NR2C2P49116 596 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PKNOX1P55347 436 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TAS2R45P59539 299 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 POU4F1Q01851 419 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 OC90Q02509 493 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 RPL6Q02878 288 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 C2orf54Q08AI8 447 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TCP10Q12799 353 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SMARCB1Q12824 385 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 RPA4Q13156 261 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SQSTM1Q13501 440 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 OXA1LQ15070 435 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 GPR33Q49SQ1 333 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PPM1LQ5SGD2 360 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 PLEKHS1Q5SXH7 462 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 IFIT1BQ5T764 474 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 C12orf60Q5U649 245 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms