RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ARFIP1P53367 373 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 YBX1P67809 324 aaKnown RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 RGS1Q08116 209 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 TGM3Q08188 693 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CSTF3Q12996 717 aaKnown RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 IL11RAQ14626 422 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 ZIC1Q15915 447 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 TMEM35AQ53FP2 167 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 YOD1Q5VVQ6 348 aaPredicted RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 PRAMEF9Q5VWM5 478 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 KANK2Q63ZY3 851 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 NIPAL1Q6NVV3 410 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 DHRS13Q6UX07 377 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 TMPRSS9Q7Z410 1059 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 WDR75Q8IWA0 830 aaKnown RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 FAM20CQ8IXL6 584 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 GPR135Q8IZ08 494 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 SRFBP1Q8NEF9 429 aaKnown RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 ADAMTS14Q8WXS8 1223 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CMTM7Q96FZ5 175 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 PPM1MQ96MI6 270 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 FCRL4Q96PJ5 515 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CDK15Q96Q40 435 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 OR2A5Q96R48 311 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 SORT1Q99523 831 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 SIKE1Q9BRV8 207 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 KLHL25Q9H0H3 589 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 BRF2Q9HAW0 419 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 PRM3Q9NNZ6 103 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 ACSS2Q9NR19 701 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 ZNF225Q9UK10 706 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 ZNF490Q9ULM2 529 aaPredicted RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 KLHL20Q9Y2M5 609 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 ADAMTS9Q9P2N4 1935 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CCDC187A0A096LP49 1063 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 A0A0J9YVX5 310 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 DCDC2BA2VCK2 349 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SRRM3A6NNA2 597 aaPredicted RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 B4E171 279 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SLC28A1O00337 649 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 VPS4BO75351 444 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 CSO75390 466 aaKnown RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 LYPLA1O75608 230 aaPredicted RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 TGDSO95455 350 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SERPINA6P08185 405 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 VIMP08670 466 aaKnown RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 PCNAP12004 261 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 BCL6P41182 706 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 TSPAN7P41732 249 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 CCR10P46092 362 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 STXBP1P61764 594 aaKnown RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 SKP1P63208 163 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 NDUFA9Q16795 377 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 GARNL3Q5VVW2 1013 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 CES4AQ5XG92 561 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 TLDC1Q6P9B6 456 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 ASPGQ86U10 573 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 ZNF740Q8NDX6 193 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 WDR20Q8TBZ3 569 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 PIWIL2Q8TC59 973 aaKnown RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 NT5CQ8TCD5 201 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SLC13A3Q8WWT9 602 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SELENOMQ8WWX9 145 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 USP7Q93009 1102 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 TM4SF19Q96DZ7 209 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 MOCOSQ96EN8 888 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 METTL2AQ96IZ6 378 aaKnown RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SERPINI1Q99574 410 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 ZPBPQ9BS86 351 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 B3GNT4Q9C0J1 378 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 FBXO8Q9NRD0 319 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 FGF21Q9NSA1 209 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 RIC8BQ9NVN3 520 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 ZDHHC2Q9UIJ5 367 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 TP53BP1Q12888 1972 aaPredicted RBP11.88□□□□□ -0.51
SNX17-208ENST00000493711 ASPMQ8IZT6 3477 aa11.88□□□□□ -0.51
SNX17-208ENST00000493711 A0A1B0GTL3 188 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 FEZF1A0PJY2 475 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 H0YGG7 62 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 FFAR3O14843 346 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 HDAC3O15379 428 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 GPR42O15529 346 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 RGS14O43566 566 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 LCMT2O60294 686 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 EDF1O60869 148 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 HBQ1P09105 142 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 TROVE2P10155 538 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNX17-208ENST00000493711 PCSK2P16519 638 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ARRB2P32121 409 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 GABRA4P48169 554 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 PDX1P52945 283 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ITGA1P56199 1179 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 RAB15P59190 212 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ARF3P61204 181 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms