RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ARF4P18085 180 aaPredicted RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CDH3P22223 829 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 EPHA2P29317 976 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR1D2P34982 312 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 GDF5P43026 501 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC6A12P48065 614 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CLCN4P51793 760 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 MAZP56270 477 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SEC61A1P61619 476 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ELP6Q0PNE2 266 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 FUT7Q11130 342 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 TRAP1Q12931 704 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 LCP2Q13094 533 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CDH18Q13634 790 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SF3B4Q15427 424 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 EXT1Q16394 746 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ACKR1Q16570 336 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF542PQ5EBM4 170 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC25A53Q5H9E4 307 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 RAET1GQ6H3X3 334 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CTR9Q6PD62 1173 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 TRIM65Q6PJ69 517 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ARMCX2Q7L311 632 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 MUC20Q8N307 709 aaPredicted RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 MINDY2Q8NBR6 621 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR2T12Q8NG77 320 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CCDC110Q8TBZ0 833 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CD99L2Q8TCZ2 262 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ELP5Q8TE02 316 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 RPL36ALQ969Q0 106 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 RAB7BQ96AH8 199 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 LGALS12Q96DT0 336 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC47A1Q96FL8 570 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF385AQ96PM9 386 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 TAAR6Q96RI8 345 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 MIS12Q9H081 205 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 DDX47Q9H0S4 455 aaKnown RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 RWDD1Q9H446 243 aaPredicted RBP3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 FAM153AQ9UHL3 310 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 ENTPD4Q9Y227 616 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 VDAC3Q9Y277 283 aa3.82□□□□□ -1.8
HMGN3P1-201ENST00000453847 KIAA1210Q9ULL0 1709 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 NCAPD2Q15021 1401 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 NCANO14594 1321 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 TMEM89A2RUT3 159 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 E5RGE8 158 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 M0R296 226 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 OVOL3O00110 214 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 PRRG2O14669 202 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 SYNGR3O43761 229 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 LANCL1O43813 399 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 HSF2BPO75031 334 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 PIGNO95427 931 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 AK1P00568 194 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 RAF1P04049 648 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 IGHV4-31P0DP07 118 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 ODC1P11926 461 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 CEACAM1P13688 526 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 DARSP14868 501 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 CPA3P15088 417 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 SCP2P22307 547 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 HSPA1LP34931 641 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 TNFSF10P50591 281 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 CDH11P55287 796 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 TUBA1BP68363 451 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 SP3Q02447 781 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 PPP1R8Q12972 351 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 GIT2Q14161 759 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 TWIST1Q15672 202 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 FASTKD1Q53R41 847 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR4C11Q6IEV9 310 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 TMEM26Q6ZUK4 368 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 COX8CQ7Z4L0 72 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZER1Q7Z7L7 766 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 CDK20Q8IZL9 346 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC24A4Q8NFF2 622 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF473Q8WTR7 871 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 UBTD2Q8WUN7 234 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 PIK3R3Q92569 461 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 MRPL53Q96EL3 112 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 COQ7Q99807 217 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 URM1Q9BTM9 101 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 SF3B5Q9BWJ5 86 aaKnown RBP3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 RAB17Q9H0T7 212 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 EBF2Q9HAK2 575 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 TMOD2Q9NZR1 351 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 ANKMY1Q9P2S6 941 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 CLIP2Q9UDT6 1046 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 IL20RAQ9UHF4 553 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC7A7Q9UM01 511 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 NSG2Q9Y328 171 aa3.81□□□□□ -1.8
HMGN3P1-201ENST00000453847 ARID1BQ8NFD5 2236 aaPredicted RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 A0A1W2PN81 502 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 O00370 1275 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 FPGTO14772 594 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 KIF5CO60282 957 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms