RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RAB31Q13636 194 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SGCAQ16586 387 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 CHRFAM7AQ494W8 412 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 FOXR2Q6PJQ5 311 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 DCUN1D3Q8IWE4 304 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SLC15A3Q8IY34 581 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 TOR1AIP2Q8NFQ8 470 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 TFGQ92734 400 aaPredicted RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 RAB7BQ96AH8 199 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SCLYQ96I15 445 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 NPHS1O60500 1241 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 TNFRSF8P28908 595 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 KCTD18Q6PI47 426 aaPredicted RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 HPS1Q92902 700 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 CENPNQ96H22 339 aaPredicted RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GGT3PA6NGU5 568 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GABRDO14764 452 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 POP7O75817 140 aaKnown RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 NPR2P20594 1047 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 HNRNPKP61978 463 aaKnown RBP eCLIP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GRASPQ7Z6J2 395 aaPredicted RBP10.88□□□□□ -0.67
SCN4A-201ENST00000435607 SLC13A3Q8WWT9 602 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 L2HGDHQ9H9P8 463 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 CDH20Q9HBT6 801 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF69Q9UC07 566 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 GNG8Q9UK08 70 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 ASTN1O14525 1302 aa10.88□□□□□ -0.67
SCN4A-201ENST00000435607 LYPLA2O95372 231 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ITGB1P05556 798 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 HEXAP06865 529 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 KLK1P06870 262 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ACADVLP49748 655 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 MPP1Q00013 466 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 CLEC12AQ5QGZ9 265 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 SEC14L1Q92503 715 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 LRRC4CQ9HCJ2 640 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 TAC3Q9UHF0 121 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 SLC22A14Q9Y267 594 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 YIPF1Q9Y548 306 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 OR4D2P58180 307 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 SLC26A5P58743 744 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 DCDC1P59894 354 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 HGSNATQ68CP4 663 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 CHRAC1Q9NRG0 131 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 HRASLS2Q9NWW9 162 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 RARRES3Q9UL19 164 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 CYP8B1Q9UNU6 501 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 VWDEQ8N2E2 1590 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 NRP1O14786 923 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 PRDX6P30041 224 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 CREB5Q02930 508 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ASTE1Q2TB18 679 aaPredicted RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 LRRC73Q5JTD7 316 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 OR9K2Q8NGE7 335 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 OR9A4Q8NGU2 314 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF358Q9NW07 568 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ABRACLQ9P1F3 81 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 C13orf42A0A1B0GVH6 325 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF217O75362 1048 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 IL1AP01583 271 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 PTDSS1P48651 473 aaKnown RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 LIMK2P53671 638 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 DPYSL2Q16555 572 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 RBM20Q5T481 1227 aaKnown RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 LDB1Q86U70 411 aaPredicted RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 TRAM1L1Q8N609 369 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 HSPA12BQ96MM6 686 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 CITED4Q96RK1 184 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 KCNK13Q9HB14 408 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 GRID2O43424 1007 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 SNX3O60493 162 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 GABBR2O75899 941 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 MMP8P22894 467 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 RBMXP38159 391 aaKnown RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 CLCA4Q14CN2 919 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 SLC36A4Q6YBV0 504 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF852Q6ZMS4 543 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 TFB2MQ9H5Q4 396 aaKnown RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 IL20RAQ9UHF4 553 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 EFCAB9A8MZ26 197 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ATE1O95260 518 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 ADAM15Q13444 863 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 NKAPLQ5M9Q1 402 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 SLC44A1Q8WWI5 657 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 HOXB13Q92826 284 aaPredicted RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
SCN4A-201ENST00000435607 URM1Q9BTM9 101 aaKnown RBP10.87□□□□□ -0.67
SCN4A-201ENST00000435607 PTPRMP28827 1452 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 A0A0G2JN53 185 aa10.86□□□□□ -0.67
SCN4A-201ENST00000435607 MAP2K7O14733 419 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms