RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 VSIG8P0DPA2 414 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 MTHFD2P13995 350 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ITGB5P18084 799 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 EGR1P18146 543 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 TNNI3P19429 210 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CCNOP22674 350 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 POU1F1P28069 291 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 SOAT1P35610 550 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CDKN1AP38936 164 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 NBL1P41271 181 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 RPS5P46782 204 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 SLC6A11P48066 632 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CARSP49589 748 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 YWHAGP61981 247 aaKnown RBP eCLIP5.34□□□□□ -1.55
RFC3-202ENST00000434425 RPL23AP62750 156 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 VSNL1P62760 191 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ILF2Q12905 390 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 KLF10Q13118 480 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 PRKAA1Q13131 559 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CALCRLQ16602 461 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 SGSM1Q2NKQ1 1148 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZCWPW2Q504Y3 356 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZC2HC1CQ53FD0 456 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 TAF1BQ53T94 588 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZNF789Q5FWF6 425 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 SPOUT1Q5T280 376 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZBTB37Q5TC79 503 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ANKRD54Q6NXT1 300 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 SHISA2Q6UWI4 295 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 RSPO2Q6UXX9 243 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 KIAA0408Q6ZU52 694 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 TRMT11Q7Z4G4 463 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 PPP1R3BQ86XI6 285 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 MCATQ8IVS2 390 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 SELENOHQ8IZQ5 122 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 FAM58AQ8N1B3 248 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 FADS6Q8N9I5 356 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 NOA1Q8NC60 698 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 KREMEN2Q8NCW0 462 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CCNYQ8ND76 341 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 OR10T2Q8NGX3 314 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZNF417Q8TAU3 575 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZCCHC10Q8TBK6 192 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 NSMCE1Q8WV22 266 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZCCHC14Q8WYQ9 949 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 POMGNT1Q8WZA1 660 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 PROX1Q92786 737 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 HAS2Q92819 552 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 GLG1Q92896 1179 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 DNAJC19Q96DA6 116 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 DAZAP1Q96EP5 407 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZNF48Q96MX3 618 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZNF578Q96N58 590 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 SLC6A18Q96N87 628 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZNF587Q96SQ5 575 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 CYP2S1Q96SQ9 504 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 PCYT2Q99447 389 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CNPY3Q9BT09 278 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 FTHL17Q9BXU8 183 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 NLNQ9BYT8 704 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 DPH1Q9BZG8 443 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CWH43Q9H720 699 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 RPF1Q9H9Y2 349 aaKnown RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 PCDHB16Q9NRJ7 776 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 EXD2Q9NVH0 621 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 HIF1ANQ9NWT6 349 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CLEC5AQ9NY25 188 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 PDP1Q9P0J1 537 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 SEMA5BQ9P283 1151 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 PTGFRNQ9P2B2 879 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 KLHL8Q9P2G9 620 aaPredicted RBP5.34□□□□□ -1.55
RFC3-202ENST00000434425 CHRNA9Q9UGM1 479 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 SNX7Q9UNH6 387 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 SHOC2Q9UQ13 582 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 VWA7Q9Y334 891 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 TSC22D4Q9Y3Q8 395 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 ZNF175Q9Y473 711 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 PCDHB7Q9Y5E2 793 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 GMPPBQ9Y5P6 360 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 RAD54BQ9Y620 910 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 IGSF9BQ9UPX0 1349 aa5.34□□□□□ -1.55
RFC3-202ENST00000434425 CACNA1IQ9P0X4 2223 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 CCDC187A0A096LP49 1063 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 A0A1B0GVG6 124 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 A0A1W2PQ72 361 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 ARHGAP42A6NI28 874 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 FAM90A20PA6NIJ5 464 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 ZNF233A6NK53 670 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 C2CD4DB7Z1M9 353 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 SHISA8B8ZZ34 492 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 H3BQF6 201 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 H7C1Q1 480 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 QSOX1O00391 747 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 ADAMDEC1O15204 470 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 CLIC2O15247 247 aa5.33□□□□□ -1.56
RFC3-202ENST00000434425 TOX3O15405 576 aaPredicted RBP5.33□□□□□ -1.56
RFC3-202ENST00000434425 SUV39H1O43463 412 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms