RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 ZNF577Q9BSK1 485 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 WACQ9BTA9 647 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 LRRC1Q9BTT6 524 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 NACAP1Q9BZK3 213 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 MTMR12Q9C0I1 747 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 NYXQ9GZU5 481 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 DDX47Q9H0S4 455 aaKnown RBP4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 RNF121Q9H920 327 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 ZBTB20Q9HC78 741 aaPredicted RBP4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 DONSONQ9NYP3 566 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 AURKCQ9UQB9 309 aa4.37□□□□□ -1.71
VTA1P1-201ENST00000414044 MED1Q15648 1581 aaPredicted RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 DIP2BQ9P265 1576 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 SAA2-SAA4A0A096LPE2 208 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 E5RGE8 158 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ZNF197O14709 1029 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 MAGEB2O15479 319 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 INSIG1O15503 277 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 GAS8O95995 478 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 RAF1P04049 648 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 MMP10P09238 476 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 IGHV4-31P0DP07 118 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 FGF5P12034 268 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 KRT3P12035 628 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 SKILP12757 684 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 GOT1P17174 413 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 MSH3P20585 1137 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 EFNA1P20827 205 aaPredicted RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 RPA1P27694 616 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 DUTP33316 252 aaKnown RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ASMTP46597 345 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 NR2C2P49116 596 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 HNRNPFP52597 415 aaKnown RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 CLDN17P56750 224 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 RPP38P78345 283 aaKnown RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 KIF5AQ12840 1032 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 OPCMLQ14982 345 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 HERC3Q15034 1050 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 INAQ16352 499 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ZC2HC1CQ53FD0 456 aaPredicted RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ARMCX4Q5H9R4 360 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 PDSS1Q5T2R2 415 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 MARK2Q7KZI7 788 aaKnown RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 PRUNE1Q86TP1 453 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 THEM5Q8N1Q8 247 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 IQCF1Q8N6M8 205 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ULK4Q96C45 1275 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ALKBH7Q9BT30 221 aaPredicted RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 RAVER2Q9HCJ3 691 aaKnown RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 GPN1Q9HCN4 374 aaPredicted RBP4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 MIS18AQ9NYP9 233 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 DNPEPQ9ULA0 475 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 NSG2Q9Y328 171 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 AP1M2Q9Y6Q5 423 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 SNAPC4Q5SXM2 1469 aa4.36□□□□□ -1.71
VTA1P1-201ENST00000414044 ANTXRLA6NF34 631 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 SLC15A5A6NIM6 579 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 H3BMM5 538 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 K7EPI3 171 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 SLC28A1O00337 649 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ATP6V1G1O75348 118 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 OAZ2O95190 189 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 PDGFBP01127 241 aaPredicted RBP4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 CXCL10P02778 98 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 HEXBP07686 556 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ZNF18P17022 549 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 LHCGRP22888 699 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ALDH4A1P30038 563 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ALDH1B1P30837 517 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 SRD5A2P31213 254 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 CETN2P41208 172 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 OR3A3P47888 321 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 HOXA1P49639 335 aaPredicted RBP4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 PDLIM4P50479 330 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 CNN1P51911 297 aaKnown RBP4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 GAS1P54826 345 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 HUNKP57058 714 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 GCNT1Q02742 428 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 HSP90AA5PQ58FG0 334 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 PRAMEF7Q5VXH5 474 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 OR6B2Q6IFH4 312 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 CD164L2Q6UWJ8 174 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ABRAXAS1Q6UWZ7 409 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 DLEU7Q6UYE1 221 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ZNF852Q6ZMS4 543 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 TUBA1AQ71U36 451 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 LRTM2Q8N967 370 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 CCDC110Q8TBZ0 833 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 MRPL38Q96DV4 380 aaKnown RBP4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 SCRN2Q96FV2 425 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 TUBA1CQ9BQE3 449 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 ZDHHC6Q9H6R6 413 aa4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 PPANQ9NQ55 473 aaKnown RBP4.35□□□□□ -1.71
VTA1P1-201ENST00000414044 POLE3Q9NRF9 147 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms