RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FARSBQ9NSD9 589 aaKnown RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 P2RX2Q9UBL9 471 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 CEMIPQ8WUJ3 1361 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 OR2B3O76000 313 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 PRKD3O94806 890 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 SOX2P48431 317 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 NDST2P52849 883 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ARL13AQ5H913 290 aaPredicted RBP8.17□□□□□ -1.1
SCN9A-203ENST00000409672 UFD1Q92890 307 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 GPR88Q9GZN0 384 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF355PQ9NSJ1 428 aa8.17□□□□□ -1.1
SCN9A-203ENST00000409672 TCRBV7S2A1N4TA0A589 114 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 SIX3O95343 332 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 THRBP10828 461 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RPS21P63220 83 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CDKN3Q16667 212 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PAQR3Q6TCH7 311 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LBX2Q6XYB7 198 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF572Q7Z3I7 529 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 C1orf52Q8N6N3 182 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PLD5Q8N7P1 536 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CNTD1Q8N815 330 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RIT1Q92963 219 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TRPV4Q9HBA0 871 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 HPSEQ9Y251 543 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 POFUT2Q9Y2G5 429 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 NRXN1Q9ULB1 1477 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 HTR3EA5X5Y0 456 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PLOD2O00469 737 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 APOL3O95236 402 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ATE1O95260 518 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ASLP04424 464 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CCNCP24863 283 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 IL10RBQ08334 325 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 WFIKKN2Q8TEU8 576 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LPGAT1Q92604 370 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TMEM209Q96SK2 561 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 SLC25A51Q9H1U9 297 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LRRC4CQ9HCJ2 640 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 GRHL1Q9NZI5 618 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RUVBL1Q9Y265 456 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 INSL5Q9Y5Q6 135 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PTPRUQ92729 1446 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TEX13DA0A0J9YY54 714 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LEFTY1O75610 366 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 AP2A1O95782 977 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 DHFRP00374 187 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ENGP17813 658 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 GJA5P36382 358 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ETV3P41162 512 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 AIF1P55008 147 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LRIT3Q3SXY7 679 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TSTD2Q5T7W7 516 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CASTOR1Q8WTX7 329 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RLN3Q8WXF3 142 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CUEDC1Q9NWM3 386 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 WNT7AO00755 349 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ADH1BP00325 375 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 GALTP07902 379 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 VEGFBP49765 207 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CORO7P57737 925 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LAPTM4AQ15012 233 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ZNF852Q6ZMS4 543 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CLEC1AQ8NC01 280 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RAD9AQ99638 391 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 MMADHCQ9H3L0 296 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CROCCQ5TZA2 2017 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ADAP00813 363 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 OR1E2P47887 323 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 NTHL1P78549 312 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PMS2P3Q13401 168 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 BTBD16Q32M84 506 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 FSTL4Q6MZW2 842 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LCLAT1Q6UWP7 414 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 DEPDC5O75140 1603 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 MDFIC2A0A1B0GVS7 189 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ANGPTL1O95841 491 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 RLN2P04090 185 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 SFTPBP07988 381 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 HK1P19367 917 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 TM4SF1P30408 202 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 CCNFP41002 786 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 DGKQP52824 942 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 DAOAP59103 153 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 DCTN2Q13561 401 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 NSDHLQ15738 373 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 SLC39A4Q6P5W5 647 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 COMTD1Q86VU5 262 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 ERI1Q8IV48 349 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 OR6N2Q8NGY6 317 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 LRTOMTQ8WZ04 291 aa8.16□□□□□ -1.1
SCN9A-203ENST00000409672 C14orf166Q9Y224 244 aaKnown RBP8.16□□□□□ -1.1
SCN9A-203ENST00000409672 A0A1W2PRQ8 180 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms