RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HSDL2Q6YN16 418 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SNX29P2Q8IUI4 249 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 METTL4Q8N3J2 472 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 OR6K2Q8NGY2 324 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 C14orf105Q9NVL8 296 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 TAS2R10Q9NYW0 307 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PCDHGB7Q9Y5F8 929 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 CLDN24A6NM45 220 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 TLL1O43897 1013 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PRMT3O60678 531 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 ATG13O75143 517 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 TRIM3O75382 744 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-202ENST00000409031 FAM163BP0C2L3 166 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 BMP4P12644 408 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 LRRN1Q6UXK5 716 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF782Q6ZMW2 699 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SNX20Q7Z614 316 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 LPPQ93052 612 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 TCEAL4Q96EI5 215 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 BEX1Q9HBH7 125 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PTGDR2Q9Y5Y4 395 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 MITFO75030 526 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SOX14O95416 240 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PRAMEF12O95522 483 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 RPS5P46782 204 aaKnown RBP17.14■□□□□ 0.33
SMPD4-202ENST00000409031 HSPB3Q12988 150 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 OXA1LQ15070 435 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 NTRK2Q16620 822 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PRAMEF17Q5VTA0 474 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 C22orf42Q6IC83 251 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SPRED1Q7Z699 444 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 NPAS3Q8IXF0 933 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SAMD12Q8N8I0 201 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 GALNT11Q8NCW6 608 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 KCNJ9Q92806 393 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SLC35G5Q96KT7 338 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 NDC1Q9BTX1 674 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PPA2Q9H2U2 334 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 ZBTB20Q9HC78 741 aaPredicted RBP17.14■□□□□ 0.33
SMPD4-202ENST00000409031 GPX3P22352 226 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 DGKZQ13574 1117 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 SPIN4Q56A73 249 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 FAM122CQ6P4D5 195 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 PDZD9Q8IXQ8 264 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 CADM3Q8N126 398 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 CYTH4Q9UIA0 394 aa17.14■□□□□ 0.33
SMPD4-202ENST00000409031 LYRM1O43325 122 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 EPOP01588 193 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 CELP19835 753 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 CASP9P55211 416 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 AP1S2P56377 157 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 SNTA1Q13424 505 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PARP16Q8N5Y8 322 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ACOT12Q8WYK0 555 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PPP1R14AQ96A00 147 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 TRIM2Q9C040 744 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 NSUN3Q9H649 340 aaKnown RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ERVW-1Q9UQF0 538 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 MYH11P35749 1972 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ACOT8O14734 319 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PLATP00750 562 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 AGTR2P50052 363 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 SKP1P63208 163 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 MRPS6P82932 125 aaKnown RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PRR5P85299 388 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 RGS1Q08116 209 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PLD1Q13393 1074 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 SMARCD3Q6STE5 483 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 RNF180Q86T96 592 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 NFKBIDQ8NI38 313 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 THAP6Q8TBB0 222 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 GPR83Q9NYM4 423 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 OR6C75A6NL08 312 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ACADLP28330 430 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 GPR1P46091 355 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 GDI2P50395 445 aaKnown RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 CLDN10P78369 228 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 SF3B4Q15427 424 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■■ 54.2
SMPD4-202ENST00000409031 FAM76BQ5HYJ3 339 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ATAD3CQ5T2N8 411 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 TPGS1Q6ZTW0 290 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 RANBP3LQ86VV4 465 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PAQR7Q86WK9 346 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF615Q8N8J6 731 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 CTRCQ99895 268 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 MMP28Q9H239 520 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 EQTNQ9NQ60 294 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 A0A1W2PQ67 120 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 A0A1W2PQL4 384 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 CAPN5O15484 640 aaPredicted RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 ACSL4O60488 711 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 TOXO94900 526 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 H2AFB2P0C5Z0 115 aa17.13■□□□□ 0.33
SMPD4-202ENST00000409031 SMAD3P84022 425 aaKnown RBP17.13■□□□□ 0.33
SMPD4-202ENST00000409031 PPIGQ13427 754 aaKnown RBP eCLIP17.13■□□□□ 0.338e-7■■■□□ 15.7
SMPD4-202ENST00000409031 PLA2G4EQ3MJ16 856 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms