RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 TAF1CQ15572 869 aaPredicted RBP17.38■□□□□ 0.37
ERCC2-201ENST00000391941 DUOXA1Q1HG43 343 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 CERS6Q6ZMG9 384 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 B3GNT7Q8NFL0 401 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 DNAJB8Q8NHS0 232 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 SAMD11Q96NU1 681 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 CNPPD1Q9BV87 410 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 TRIM39Q9HCM9 518 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 NPIPB15A6NHN6 443 aaPredicted RBP17.38■□□□□ 0.37
ERCC2-201ENST00000391941 LOC110117498-PIK3R3F6TDL0 507 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 PCDH17O14917 1159 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 IDH3BO43837 385 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 SCN2BO60939 215 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 ANXA5P08758 320 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 CRATP43155 626 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 OR2B6P58173 313 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 B4GALNT1Q00973 533 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 SPIBQ01892 262 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 CHIT1Q13231 466 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 EXOC3L2Q2M3D2 409 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 FAHD1Q6P587 224 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 SLC44A2Q8IWA5 706 aaPredicted RBP17.38■□□□□ 0.37
ERCC2-201ENST00000391941 TP53INP1Q96A56 240 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 TIGARQ9NQ88 270 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 SH3BP4Q9P0V3 963 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 HAT1O14929 419 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SEMG1P04279 462 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 RPLP0P05388 317 aaKnown RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 ZDHHC11BP0C7U3 371 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CCSMST1Q4G0I0 132 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 ATP13A5Q4VNC0 1218 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CBLL1Q75N03 491 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 AMER2Q8N7J2 671 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 IPCEF1Q8WWN9 437 aaPredicted RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 HRASLS5Q96KN8 279 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CEP44Q9C0F1 390 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SLC32A1Q9H598 525 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 NDUFAF4Q9P032 175 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CFAP20Q9Y6A4 193 aaKnown RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 ISPDA4D126 451 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CLCA1A8K7I4 914 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 PDZK1P1A8MUH7 402 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 H3BQ06 376 aaPredicted RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CDK1P06493 297 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 ITGALP20701 1170 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SSTR4P31391 388 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 PPIGQ13427 754 aaKnown RBP eCLIP17.37■□□□□ 0.374e-7■■■■□ 20.5
ERCC2-201ENST00000391941 LRRC26Q2I0M4 334 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 ZNF181Q2M3W8 571 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CCDC80Q76M96 950 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SERPINA11Q86U17 422 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 OR10G2Q8NGC3 310 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 TRMT61AQ96FX7 289 aaKnown RBP17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SPASTQ9UBP0 616 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 CLEC2DQ9UHP7 191 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 TBC1D24Q9ULP9 559 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 LYVE1Q9Y5Y7 322 aa17.37■□□□□ 0.37
ERCC2-201ENST00000391941 SUV39H1O43463 412 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 SOX14O95416 240 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 HOXB6P17509 224 aaKnown RBP17.36■□□□□ 0.37
ERCC2-201ENST00000391941 ITGA1P56199 1179 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 TTLL9Q3SXZ7 439 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 RNF165Q6ZSG1 346 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 EIF3MQ7L2H7 374 aaKnown RBP17.36■□□□□ 0.37
ERCC2-201ENST00000391941 MED8Q96G25 268 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 CDK5RAP1Q96SZ6 601 aaKnown RBP17.36■□□□□ 0.37
ERCC2-201ENST00000391941 TBC1D14Q9P2M4 693 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 FZD6O60353 706 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 KRT75O95678 551 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 KRT8P05787 483 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 AOAHP28039 575 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 MRPS15P82914 257 aaKnown RBP17.36■□□□□ 0.37
ERCC2-201ENST00000391941 ELP6Q0PNE2 266 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 SLAMF1Q13291 335 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 BAK1Q16611 211 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 TMC5Q6UXY8 1006 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 ABI3BPQ7Z7G0 1075 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 MMAAQ8IVH4 418 aaKnown RBP17.36■□□□□ 0.37
ERCC2-201ENST00000391941 GPR151Q8TDV0 419 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 UBTD2Q8WUN7 234 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 BCL7CQ8WUZ0 217 aaPredicted RBP17.36■□□□□ 0.37
ERCC2-201ENST00000391941 TCF25Q9BQ70 676 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 SLC29A3Q9BZD2 475 aa17.36■□□□□ 0.37
ERCC2-201ENST00000391941 KCNE1BA0A087WTH5 132 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 TMEM202A6NGA9 273 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 TAF4O00268 1085 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 HOXC11O43248 304 aaPredicted RBP17.35■□□□□ 0.37
ERCC2-201ENST00000391941 APOL3O95236 402 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 CSF2P04141 144 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 RPS3P23396 243 aaKnown RBP eCLIP17.35■□□□□ 0.37
ERCC2-201ENST00000391941 STK19P49842 368 aaPredicted RBP17.35■□□□□ 0.37
ERCC2-201ENST00000391941 TUBA1BP68363 451 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 MC1RQ01726 317 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 PLD1Q13393 1074 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 INO80DQ53TQ3 878 aaPredicted RBP17.35■□□□□ 0.37
ERCC2-201ENST00000391941 SPANXN2Q5MJ10 180 aa17.35■□□□□ 0.37
ERCC2-201ENST00000391941 PNCKQ6P2M8 343 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms