RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 HES7Q9BYE0 225 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 NANSQ9NR45 359 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PCDHGC4Q9Y5F7 938 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 DHRS12A0PJE2 317 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 H0YJX3 145 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 MTX2O75431 263 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 SYPP08247 313 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 MGST1P10620 155 aaKnown RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 ATF6P18850 670 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 OGNP20774 298 aaKnown RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 DLSTP36957 453 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PBX3P40426 434 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 CX3CR1P49238 355 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 DUSP3P51452 185 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 CACNG1Q06432 222 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 DLX2Q07687 328 aaPredicted RBP9.5□□□□□ -0.89
CHD3-202ENST00000358181 CAPSQ13938 189 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 RAB30Q15771 203 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 BCL2A1Q16548 175 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 SERPINA9Q86WD7 417 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 GPR137CQ8N3F9 429 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PGAM5Q96HS1 289 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ACTR6Q9GZN1 396 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 PORCNQ9H237 461 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ABCG2Q9UNQ0 655 aa9.5□□□□□ -0.89
CHD3-202ENST00000358181 ERI3O43414 337 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 TNFSF4P23510 183 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 HTD2P86397 168 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 VMACQ2NL98 169 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 USP53Q70EK8 1073 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 OR2T12Q8NG77 320 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 STK35Q8TDR2 534 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 MTERF1Q99551 399 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 MRPL57Q9BQC6 102 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 SMG9Q9H0W8 520 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 KCNK6Q9Y257 313 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 PCDHGB7Q9Y5F8 929 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 BCL9O00512 1426 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 TTC24A2A3L6 582 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 YDJCA8MPS7 323 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 AIPO00170 330 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 DVL1O14640 695 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 NPHS1O60500 1241 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 KLF8O95600 359 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 UGT1A3P35503 534 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 BDKRB1P46663 353 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 DVL1P1P54792 670 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 RBPJQ06330 500 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 PMS2P3Q13401 168 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 C1orf61Q13536 156 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 TMEM69Q5SWH9 247 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 ALYREFQ86V81 257 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 GPR21Q99679 349 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 GINS3Q9BRX5 216 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 MECRQ9BV79 373 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 TMEM100Q9NV29 134 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 PCYT1BQ9Y5K3 369 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 FABP12A6NFH5 140 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 SHBGP04278 402 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 P04436 131 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 MARCKSL1P49006 195 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 ERVK-16P61578 105 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 CDK16Q00536 496 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 SCAPQ12770 1279 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 TPRA1Q86W33 373 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 NLE1Q9NVX2 485 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 VSX1Q9NZR4 365 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 MGAT4CQ9UBM8 478 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 RBM47A0AV96 593 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 ATP4AP20648 1035 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 PSMA1P25786 263 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 GRM5P41594 1212 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 AKR1C2P52895 323 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 INHBEP58166 350 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 TAP2Q03519 686 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 KCNC4Q03721 635 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 ARL9Q6T311 187 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 MIPEPQ99797 713 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 EURLQ9NYK6 297 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 ZFR2Q9UPR6 939 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 PCDHGB2Q9Y5G2 931 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 BTBD17A6NE02 478 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 CLCA1A8K7I4 914 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 H7C417 338 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 CYP3A5P20815 502 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 PPIBP23284 216 aaKnown RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 KDELR1P24390 212 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 CLCNKAP51800 687 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 RRAS2P62070 204 aaPredicted RBP9.49□□□□□ -0.89
CHD3-202ENST00000358181 DCST2Q5T1A1 773 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 NIPAL3Q6P499 406 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 APBB2Q92870 758 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 ATG5Q9H1Y0 275 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 ARL8BQ9NVJ2 186 aa9.49□□□□□ -0.89
CHD3-202ENST00000358181 AASSQ9UDR5 926 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms