RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CDH12P55289 794 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 B2MP61769 119 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 GBE1Q04446 702 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 CD47Q08722 323 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 NDUFA9Q16795 377 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ZNF691Q5VV52 312 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 MARCH9Q86YJ5 346 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 ZNF680Q8NEM1 530 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 NEIL3Q8TAT5 605 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 DNAJB3Q8WWF6 145 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 S100A16Q96FQ6 103 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 DOK1Q99704 481 aa4.9□□□□□ -1.63
SKP1-202ENST00000353411 EXOSC1Q9Y3B2 195 aaKnown RBP4.9□□□□□ -1.63
SKP1-202ENST00000353411 A8MUA0 341 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 EEF1E1O43324 174 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 CA12O43570 354 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TSPAN6O43657 245 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ARL6IP5O75915 188 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PRPS2P11908 318 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 COL6A1P12109 1028 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 DGKAP23743 735 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PTBP1P26599 531 aaKnown RBP eCLIP4.89□□□□□ -1.632e-7■□□□□ 9.9
SKP1-202ENST00000353411 NPRL3Q12980 569 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CTBP1Q13363 440 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ZER1Q7Z7L7 766 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PHACTR4Q8IZ21 702 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SCARB1Q8WTV0 552 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 HAS1Q92839 578 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 MFSD14AQ96MC6 490 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FCRL3Q96P31 734 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 ADAM2Q99965 735 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TRIM36Q9NQ86 728 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CKLFQ9UBR5 152 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TSPAN16Q9UKR8 245 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CDH10Q9Y6N8 788 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 C5orf51A6NDU8 294 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ARPC5O15511 151 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 RPLP2P05387 115 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 JUNP05412 331 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 CSN2P05814 226 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ZNF7P17097 686 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 IL1R2P27930 398 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CCR1P32246 355 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TNFSF8P32971 234 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 HAAOP46952 286 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TTPAP49638 278 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TAS2R43P59537 309 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ASAH1Q13510 395 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SPHARQ15513 63 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CLLU1Q5K131 121 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 GSG1LQ6UXU4 331 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ENTHD1Q8IYW4 607 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 RNF149Q8NC42 400 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ACBD6Q9BR61 282 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SNRNP25Q9BV90 132 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 RPS10P5Q9NQ39 176 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CRLS1Q9UJA2 301 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CACNG2Q9Y698 323 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SMCO3A2RU48 225 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SOCS7O14512 581 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FABP7O15540 132 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 KCNJ13O60928 360 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 IFNGP01579 166 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 UCHL1P09936 223 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SLC2A5P22732 501 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CEBPGP53567 150 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 GDF10P55107 478 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PER3P56645 1201 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 BTG1P62324 171 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 MSS51Q4VC12 460 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 C14orf28Q4W4Y0 310 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SYT6Q5T7P8 510 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 OTOP1Q7RTM1 612 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SPATA22Q8NHS9 363 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 NANPQ8TBE9 248 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SETD7Q8WTS6 366 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 KLK4Q9Y5K2 254 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 MMP20O60882 483 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 GADD45GO95257 159 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 IVDP26440 423 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 GZMKP49863 264 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 OPCMLQ14982 345 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FAM174BQ3ZCQ3 159 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FLYWCH1Q4VC44 716 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 AKR7LQ8NHP1 331 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 FBRSQ9HAH7 460 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 LAMA4Q16363 1823 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 A0A075B6Q4 140 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TCAF2A6NFQ2 919 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 IMPA2O14732 288 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 PCDH17O14917 1159 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 SORBS2O94875 1100 aaKnown RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 XKP51811 444 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 CACNB2Q08289 660 aaPredicted RBP4.89□□□□□ -1.63
SKP1-202ENST00000353411 SV2CQ496J9 727 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 RAB41Q5JT25 222 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 MARC1Q5VT66 337 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TEX261Q6UWH6 196 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 TPGS1Q6ZTW0 290 aa4.89□□□□□ -1.63
SKP1-202ENST00000353411 ILDR2Q71H61 639 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms