RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 GDPGP1Q6ZNW5 385 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 HTR3DQ70Z44 454 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 CBLL1Q75N03 491 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 GLT6D1Q7Z4J2 308 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 LIX1LQ8IVB5 337 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PEX5LQ8IYB4 626 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PHACTR4Q8IZ21 702 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 SLC22A15Q8IZD6 547 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PSD4Q8NDX1 1056 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 OR4K2Q8NGD2 314 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PHOX2BQ99453 314 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 GDF15Q99988 308 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 NTMT1Q9BV86 223 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 CLPBQ9H078 707 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 SERHLQ9NQF3 203 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 ASAH2Q9NR71 780 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 ENOPH1Q9UHY7 261 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PCDHGB3Q9Y5G1 929 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 CXorf51AA0A1B0GTR3 108 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 C8AP07357 584 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 M6PRP20645 277 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 DDX6P26196 483 aaKnown RBP eCLIP15.34■□□□□ 0.052e-10■□□□□ 8.7
HMGA1-202ENST00000347617 HOXD9P28356 352 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-202ENST00000347617 ACVRL1P37023 503 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 EPHA5P54756 1037 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 FCHO2Q0JRZ9 810 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 VEZF1Q14119 521 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PTPRCAPQ14761 206 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 VMACQ2NL98 169 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 YIF1BQ5BJH7 314 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 ARMC4Q5T2S8 1044 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 MPP7Q5T2T1 576 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 CCNJQ5T5M9 372 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
HMGA1-202ENST00000347617 C11orf74Q86VG3 221 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 CCDC71Q8IV32 467 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-202ENST00000347617 ZZZ3Q8IYH5 903 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 CPXM2Q8N436 756 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 SUN5Q8TC36 379 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 SPPL3Q8TCT6 385 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 GGHQ92820 318 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 WDFY2Q96P53 400 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 PSKH2Q96QS6 385 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 OR2A14Q96R47 310 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 TCF25Q9BQ70 676 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 MCOLN1Q9GZU1 580 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 TNKS2Q9H2K2 1166 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 TMEM245Q9H330 911 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 AASDHPPTQ9NRN7 309 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 RASSF1Q9NS23 344 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 THUMPD1Q9NXG2 353 aaKnown RBP15.34■□□□□ 0.05
HMGA1-202ENST00000347617 LSM7Q9UK45 103 aaKnown RBP15.34■□□□□ 0.05
HMGA1-202ENST00000347617 ASB1Q9Y576 335 aa15.34■□□□□ 0.05
HMGA1-202ENST00000347617 SLC35F4A4IF30 521 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 EFCAB10A6NFE3 127 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 H7C0S8 307 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 FFAR2O15552 330 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 NIPSNAP2O75323 286 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 GABRR2P28476 465 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 KDELR2P33947 212 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 NUDT1P36639 197 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 RGS4P49798 205 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 PCDH1Q08174 1060 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 PRSS36Q5K4E3 855 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 C10orf62Q5T681 223 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 DNAJC14Q6Y2X3 702 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 GAREM2Q75VX8 874 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 ZNF605Q86T29 641 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 NOXA1Q86UR1 476 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 NLGN4XQ8N0W4 816 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 CFAP52Q8N1V2 620 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 STX19Q8N4C7 294 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 HJURPQ8NCD3 748 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 ADAMTS19Q8TE59 1207 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 NELL1Q92832 810 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 USP7Q93009 1102 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 SDHCQ99643 169 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 BARD1Q99728 777 aaKnown RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 RHNO1Q9BSD3 238 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 FAM126AQ9BYI3 521 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 CNOT2Q9NZN8 540 aaKnown RBP15.33■□□□□ 0.04
HMGA1-202ENST00000347617 ZMYM5Q9UJ78 669 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 OARD1Q9Y530 152 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 SPO11Q9Y5K1 396 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 PLXNA4Q9HCM2 1894 aa15.33■□□□□ 0.04
HMGA1-202ENST00000347617 LOC100506127A0A0U1RQW1 187 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 SH3D21A4FU49 640 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 NPIPB8E9PQR5 432 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 H3BQ06 376 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-202ENST00000347617 MANBAO00462 879 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 SEMA3DO95025 777 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 CRYZL1O95825 349 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 RHOCP08134 193 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 ADORA3P0DMS8 318 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 BCKDHAP12694 445 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 IL7P13232 177 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 CYP2A7P20853 494 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 PRPH2P23942 346 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 PTPN6P29350 595 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms