RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CAV3P56539 151 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 LAIR2Q6ISS4 152 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 SHFQ7M4L6 423 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 PRSS48Q7RTY5 328 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 CYP4Z2PQ8N1L4 340 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 NIPSNAP1Q9BPW8 284 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 HDHD2Q9H0R4 259 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 CLMPQ9H6B4 373 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 PLSCR3Q9NRY6 295 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 KCTD5Q9NXV2 234 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 C5AR2Q9P296 337 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ITGB1BP2Q9UKP3 347 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 NOX1Q9Y5S8 564 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 PEX16Q9Y5Y5 336 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 M0QZQ0 153 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 SLC19A1P41440 591 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 BDKRB1P46663 353 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 CLDN8P56748 225 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ADGRF1Q5T601 910 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
PCDH8-201ENST00000338862 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
PCDH8-201ENST00000338862 BBS7Q8IWZ6 715 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 GGHQ92820 318 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ARMC5Q96C12 935 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 OMA1Q96E52 524 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
PCDH8-201ENST00000338862 IRF2BPLQ9H1B7 796 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 TAS2R9Q9NYW1 312 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 LTBP4Q8N2S1 1624 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 KCNK2O95069 426 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 PSKH1P11801 424 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 IL12RB1P42701 662 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ARF5P84085 180 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ZMAT1Q5H9K5 638 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 TRIQKQ629K1 86 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 KAT2AQ92830 837 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 ITPKCQ96DU7 683 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 FAM129BQ96TA1 746 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 CPPED1Q9BRF8 314 aaPredicted RBP13.66□□□□□ -0.22
PCDH8-201ENST00000338862 YIPF4Q9BSR8 244 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 CAPN10Q9HC96 672 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 UCKL1Q9NWZ5 548 aa13.66□□□□□ -0.22
PCDH8-201ENST00000338862 RETP07949 1114 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 PCMT1P22061 227 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 PSMA1P25786 263 aaKnown RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 RYKP34925 604 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 EIF2DP41214 584 aaKnown RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 CASP3P42574 277 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 CLLU1OSQ5K130 101 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 RNF130Q86XS8 419 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 IQCF1Q8N6M8 205 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 C8orf48Q96LL4 319 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 SLC35A5Q9BS91 424 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 TRIM64CA6NLI5 447 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 PCDH17O14917 1159 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 SCAMP1O15126 338 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 NUAK1O60285 661 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 CH25HO95992 272 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 IGFBP1P08833 259 aaPredicted RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 PRR35P0CG20 571 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 ALPPL2P10696 532 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 SUOXP51687 545 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 HSPB3Q12988 150 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 MRPL28Q13084 256 aaKnown RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 AFMIDQ63HM1 303 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 USP30Q70CQ3 517 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 GDPD3Q7L5L3 318 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 TRAPPC5Q8IUR0 188 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 VRK3Q8IV63 474 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 B3GNT7Q8NFL0 401 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 GPR151Q8TDV0 419 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 EMILIN2Q9BXX0 1053 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 TBC1D17Q9HA65 648 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 GPBP1L1Q9HC44 474 aaPredicted RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 ATP6V1HQ9UI12 483 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 OARD1Q9Y530 152 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 A0A1B0GVC2 190 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 FABP12A6NFH5 140 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 A6NIN4 97 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 WNT9AO14904 365 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 IGSF6O95976 241 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 HOXD8P13378 290 aaPredicted RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 PRPS1L1P21108 318 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.22
PCDH8-201ENST00000338862 TJAP1Q5JTD0 557 aa13.65□□□□□ -0.22
PCDH8-201ENST00000338862 CLEC12AQ5QGZ9 265 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms