RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 FZD4Q9ULV1 537 aa20.62■□□□□ 0.89
LIMS2-201ENST00000324938 EXO1Q9UQ84 846 aaKnown RBP20.62■□□□□ 0.89
LIMS2-201ENST00000324938 RNASET2O00584 256 aaKnown RBP20.61■□□□□ 0.89
LIMS2-201ENST00000324938 ABCB1P08183 1280 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF8P17098 575 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-201ENST00000324938 ACADLP28330 430 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 NUP107P57740 925 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 CD47Q08722 323 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF763Q0D2J5 394 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 GAB1Q13480 694 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 C16orf72Q14CZ0 275 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 GALNT10Q86SR1 603 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 C12orf76Q8N812 135 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-201ENST00000324938 OR13F1Q8NGS4 319 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 OR2L2Q8NH16 312 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.61■□□□□ 0.89
LIMS2-201ENST00000324938 HSH2DQ96JZ2 352 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 BHLHE41Q9C0J9 482 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-201ENST00000324938 BLOC1S6Q9UL45 172 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 VPS4AQ9UN37 437 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 AP1M2Q9Y6Q5 423 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 LAMA3Q16787 3333 aa20.61■□□□□ 0.89
LIMS2-201ENST00000324938 HEPACAM2A8MVW5 462 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 H3BMQ9 156 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 VEGFDO43915 354 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 POP7O75817 140 aaKnown RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 IGFBP5P24593 272 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ISL1P61371 349 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 GRSF1Q12849 480 aaKnown RBP eCLIP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 TSTA3Q13630 321 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 MEP1AQ16819 746 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 GPR107Q5VW38 600 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 DHRS4L2Q6PKH6 230 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 CRTC3Q6UUV7 619 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ERN2Q76MJ5 926 aaKnown RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 VTCN1Q7Z7D3 282 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF784Q8NCA9 323 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 SLC5A11Q8WWX8 675 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 COG8Q96MW5 612 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ASB16Q96NS5 453 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 DYRK4Q9NR20 520 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 TMEM9Q9P0T7 183 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF282Q9UDV7 671 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 RYKP34925 604 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 VLDLRP98155 873 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 TOP3AQ13472 1001 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 RGNQ15493 299 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ZNF385BQ569K4 471 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 XAF1Q6GPH4 301 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 PDE12Q6L8Q7 609 aaKnown RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 CEP68Q76N32 757 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 ARMCX6Q7L4S7 300 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 COMMD6Q7Z4G1 85 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 SFTPA1Q8IWL2 248 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 REEP4Q9H6H4 257 aa20.6■□□□□ 0.89
LIMS2-201ENST00000324938 CCDC177Q9NQR7 707 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-201ENST00000324938 hCG_2039718K7EN88 272 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 FPR1P21462 350 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 GSTM2P28161 218 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 DNAJA1P31689 397 aaKnown RBP20.59■□□□□ 0.89
LIMS2-201ENST00000324938 ARHGDIAP52565 204 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 NFE2L1Q14494 772 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 HIST2H2ACQ16777 129 aaPredicted RBP20.59■□□□□ 0.89
LIMS2-201ENST00000324938 HIST2H2AA3Q6FI13 130 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 LAIR2Q6ISS4 152 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 NXPE4Q6UWF7 544 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 TMC5Q6UXY8 1006 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 UNC5DQ6UXZ4 953 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 PIWIL3Q7Z3Z3 882 aaKnown RBP20.59■□□□□ 0.89
LIMS2-201ENST00000324938 C11orf96Q7Z7L8 435 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 CYP4Z1Q86W10 505 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 LMNTD1Q8N9Z9 388 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 PIK3C3Q8NEB9 887 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 FBLIM1Q8WUP2 373 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 BARD1Q99728 777 aaKnown RBP20.59■□□□□ 0.89
LIMS2-201ENST00000324938 ASPSCR1Q9BZE9 553 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 ZDHHC5Q9C0B5 715 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 FANCEQ9HB96 536 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 SH3BP4Q9P0V3 963 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 TRIM64BA6NI03 449 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 BCKDKO14874 412 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 SEC14L2O76054 403 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 NUDT7P0C024 238 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 PCGF2P35227 344 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 ITGA1P56199 1179 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 ADGRD2Q7Z7M1 963 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 OR4A15Q8NGL6 344 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 GOT1L1Q8NHS2 421 aaPredicted RBP20.59■□□□□ 0.89
LIMS2-201ENST00000324938 GAB3Q8WWW8 586 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 SMARCD2Q92925 531 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 NRBF2Q96F24 287 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 BAG5Q9UL15 447 aa20.59■□□□□ 0.89
LIMS2-201ENST00000324938 ATE1O95260 518 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 MYOGP15173 224 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 TUBA3CQ13748 450 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 PDE7AQ13946 482 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 KDM4DQ6B0I6 523 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 HORMAD1Q86X24 394 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 CXorf40AQ8TE69 158 aa20.58■□□□□ 0.89
LIMS2-201ENST00000324938 OR52A5Q9H2C5 316 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms