RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SEMG2Q02383 582 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 TP53BP2Q13625 1128 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 IRF3Q14653 427 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 CDK10Q15131 360 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 SF1Q15637 639 aaKnown RBP12.97□□□□□ -0.33
SKA3-202ENST00000314759 KCNA10Q16322 511 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 ZFP69Q49AA0 526 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 FAM26DQ5JW98 314 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 LYPLAL1Q5VWZ2 237 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 RFPL4BQ6ZWI9 263 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
SKA3-202ENST00000314759 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 RAD9AQ99638 391 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 ZNF226Q9NYT6 803 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 TBC1D24Q9ULP9 559 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 FZD4Q9ULV1 537 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 PCDHB11Q9Y5F2 797 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 CYBAP13498 195 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 PXNP49023 591 aaPredicted RBP12.97□□□□□ -0.33
SKA3-202ENST00000314759 UGT2B15P54855 530 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 GALK2Q01415 458 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 LRRC26Q2I0M4 334 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 FAM214AQ32MH5 1076 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 Q5BKY6 102 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 CDKL4Q5MAI5 379 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 ZNF544Q6NX49 715 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 TTC23LQ6PF05 361 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 GALNT12Q8IXK2 581 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 CYP4Z2PQ8N1L4 340 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 OR8J2Q8NGG1 315 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 SH3KBP1Q96B97 665 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 KCNS3Q9BQ31 491 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 CHST8Q9H2A9 424 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 PAQR5Q9NXK6 330 aaPredicted RBP12.97□□□□□ -0.33
SKA3-202ENST00000314759 NDUFAF4Q9P032 175 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 PADI2Q9Y2J8 665 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 WBP11Q9Y2W2 641 aaKnown RBP12.97□□□□□ -0.33
SKA3-202ENST00000314759 PEX16Q9Y5Y5 336 aa12.97□□□□□ -0.33
SKA3-202ENST00000314759 TNFRSF11BO00300 401 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CCRL2O00421 344 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 AOC2O75106 756 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 GCM2O75603 506 aaPredicted RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 ALX3O95076 343 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 APOA1P02647 267 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 HSMCR30P0CW71 290 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CBSLP0DN79 551 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 ACPPP15309 386 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 GABRB1P18505 474 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 TNFRSF1BP20333 461 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 ITPKAP23677 461 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CBSP35520 551 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 SLC6A12P48065 614 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 AP1S1P61966 158 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 ST3GAL4Q11206 333 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 PPIGQ13427 754 aaKnown RBP eCLIP12.96□□□□□ -0.33
SKA3-202ENST00000314759 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 TAF1CQ15572 869 aaPredicted RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 FBXO43Q4G163 708 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 ANKS3Q6ZW76 656 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 TSPAN33Q86UF1 283 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 PAF1Q8N7H5 531 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CDC26Q8NHZ8 85 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 SKA2Q8WVK7 121 aaPredicted RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 FCRL1Q96LA6 429 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 FAM120CQ9NX05 1096 aaKnown RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 MARCH5Q9NX47 278 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 TAS2R16Q9NYV7 291 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 MBD1Q9UIS9 605 aaPredicted RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 PCDHGA2Q9Y5H1 932 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 OR51B4Q9Y5P0 310 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 SNX8Q9Y5X2 465 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CENPXA8MT69 81 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 M0R129 80 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 TBL1XO60907 577 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CYP7B1O75881 506 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 DEFA1P59665 94 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 DEFA3P59666 94 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 B4GALNT1Q00973 533 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 CHRNEQ04844 493 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 HSPA14Q0VDF9 509 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 GPR33Q49SQ1 333 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 C10orf62Q5T681 223 aaPredicted RBP12.96□□□□□ -0.33
SKA3-202ENST00000314759 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 TAS1R1Q7RTX1 841 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 STX19Q8N4C7 294 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 GPR26Q8NDV2 337 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 OR52J3Q8NH60 311 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 NIPSNAP1Q9BPW8 284 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 DOHHQ9BU89 302 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 SLC12A9Q9BXP2 914 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 RAPGEFL1Q9UHV5 662 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 MKLN1Q9UL63 735 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
SKA3-202ENST00000314759 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 NT5C1B-RDH14C9J2C7 533 aa12.95□□□□□ -0.34
SKA3-202ENST00000314759 ADAM12O43184 909 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms