RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ATXN10Q9UBB4 475 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 CYP8B1Q9UNU6 501 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 CLDN25C9JDP6 229 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 TLR4O00206 839 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 NADK2Q4G0N4 442 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 ARHGAP40Q5TG30 622 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 PGBD2Q6P3X8 592 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 C1QTNF1Q9BXJ1 281 aa18.25■□□□□ 0.51
MBD3-201ENST00000156825 SOX17Q9H6I2 414 aaPredicted RBP18.25■□□□□ 0.51
MBD3-201ENST00000156825 FABP12A6NFH5 140 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 SLC35E2BP0CK96 405 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 ALDH3A2P51648 485 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 MLLT1Q03111 559 aaPredicted RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 EMX2Q04743 252 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 SLC35F1Q5T1Q4 408 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 ERN2Q76MJ5 926 aaKnown RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 COMMD4Q9H0A8 199 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 FZD3Q9NPG1 666 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 HRASLS2Q9NWW9 162 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 ACTR3BQ9P1U1 418 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 RPL36Q9Y3U8 105 aaKnown RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 PCDHB11Q9Y5F2 797 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 KIAA0100Q14667 2235 aaKnown RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 FAM170BA6NMN3 283 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 TLX2O43763 284 aaPredicted RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 TSPAN5P62079 268 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 PHOSPHO1Q8TCT1 267 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 NDC1Q9BTX1 674 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 S1PR4O95977 384 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 NNATQ16517 81 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 ZNF676Q8N7Q3 588 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 GLYATL1Q969I3 302 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 THUMPD1Q9NXG2 353 aaKnown RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 LATO43561 262 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 RHDQ02161 417 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 MEP1AQ16819 746 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 LDLRAD1Q5T700 205 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 PLA2G15Q8NCC3 412 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 SEC61A2Q9H9S3 476 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 SLC10A3P09131 477 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 CD1DP15813 335 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 EIF1AXP47813 144 aaKnown RBP18.24■□□□□ 0.51
MBD3-201ENST00000156825 SCN1BQ07699 218 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 EOGTQ5NDL2 527 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 TSPAN33Q86UF1 283 aa18.24■□□□□ 0.51
MBD3-201ENST00000156825 RBM47A0AV96 593 aaKnown RBP18.23■□□□□ 0.51
MBD3-201ENST00000156825 NRG3P56975 720 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 SYVN1Q86TM6 617 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 NAXEQ8NCW5 288 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 PYURFQ96I23 114 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 LIN28AQ9H9Z2 209 aaKnown RBP18.23■□□□□ 0.51
MBD3-201ENST00000156825 BNIP3Q12983 259 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 KLHL22Q53GT1 634 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 SFT2D3Q587I9 215 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 BICRALQ6AI39 1079 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 TMEM25Q86YD3 366 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 PROKR2Q8NFJ6 384 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 ANKRD12Q6UB98 2062 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 BLOC1S5-TXNDC5H3BN57 136 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 H3BSA7 217 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 CSN2P05814 226 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 RING1Q06587 406 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 CNPY1Q3B7I2 92 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 COLEC12Q5KU26 742 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 GATSQ8NAP1 163 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 PXYLP1Q8TE99 480 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 TRIM2Q9C040 744 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 TLX3O43711 291 aaPredicted RBP18.23■□□□□ 0.51
MBD3-201ENST00000156825 DFNA5O60443 496 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 CD2P06729 351 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 MLLT10P55197 1068 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 RPL26P61254 145 aaKnown RBP18.23■□□□□ 0.51
MBD3-201ENST00000156825 ZFP69Q49AA0 526 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 LINGO2Q7L985 606 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 CAMK1GQ96NX5 476 aa18.23■□□□□ 0.51
MBD3-201ENST00000156825 SDHDO14521 159 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 LEPRP48357 1165 aaKnown RBP18.22■□□□□ 0.51
MBD3-201ENST00000156825 AFF1P51825 1210 aaKnown RBP18.22■□□□□ 0.51
MBD3-201ENST00000156825 OR12D2P58182 307 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 ZNF267Q14586 743 aaPredicted RBP18.22■□□□□ 0.51
MBD3-201ENST00000156825 RAB30Q15771 203 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 TECRLQ5HYJ1 363 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 DMRTB1Q96MA1 342 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 IGKV6D-21A0A0A0MT36 114 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 HEPACAM2A8MVW5 462 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 RTCAO00442 366 aaKnown RBP18.22■□□□□ 0.51
MBD3-201ENST00000156825 LINGO3P0C6S8 592 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 RPS3AP61247 264 aaKnown RBP18.22■□□□□ 0.51
MBD3-201ENST00000156825 ABHD18Q0P651 414 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 NANOGP8Q6NSW7 305 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 NOXRED1Q6NXP6 359 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 OR52B6Q8NGF0 335 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 RAB2BQ8WUD1 216 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 CITED4Q96RK1 184 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 P2RY13Q9BPV8 354 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 NANOGQ9H9S0 305 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 RC3H2Q9HBD1 1191 aaKnown RBP18.22■□□□□ 0.51
MBD3-201ENST00000156825 SOCS5O75159 536 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 MATN1P21941 496 aa18.22■□□□□ 0.51
MBD3-201ENST00000156825 CD70P32970 193 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms