RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Sntg1Q925E1 517 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 PyurfQ9D1C3 112 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gnao1P18872 354 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Bend4P86174 541 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1395Q8VGD7 317 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fam96bQ9D187 163 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Spin2gA0A0N4SW15 236 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1471F6QVZ8 314 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Spin2eJ3QNQ0 234 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm6803J3QPI8 144 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Klhl8P59280 629 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Grsf1Q8C5Q4 479 aaKnown RBP16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cst9Q9Z0H6 137 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rpl10Q6ZWV3 214 aaKnown RBP16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ndst3Q9EQH7 873 aa16.16■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm30302A0A1Y7VN40 1110 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc43a3A2AVZ9 502 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cyp2w1E9Q816 493 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Npbwr1P49681 329 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hsd11b1P50172 292 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Mthfd1lQ3V3R1 977 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zcchc9Q8R1J3 271 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Atg10Q8R1P4 215 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Mrps5Q99N87 432 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ccdc167Q9D162 97 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slamf9Q9D780 285 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Coro1bQ9WUM3 484 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Trbv4A0A075B5I2 113 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Adgrf2E9Q4J9 644 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Csnk2a2O54833 350 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rnf180Q3U827 592 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rftn1Q6A0D4 554 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fbxo33Q8VE08 562 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gbe1Q9D6Y9 702 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Lin37Q9D8N6 246 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc7a7Q9Z1K8 510 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Trdmt1O55055 415 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fzd4Q61088 537 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 RgnQ64374 299 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr299Q7TS05 330 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 CblcQ80XL1 496 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Yipf4Q8C407 246 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hbp1Q8R316 516 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1366A0A1W2P740 328 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tatdn2B7ZNL9 783 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm5519D3Z175 170 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Il6P08505 211 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cxcr2P35343 359 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fv1P70213 459 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Med26Q7TN02 588 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc34a3Q80SU6 601 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pamr1Q8BU25 720 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cant1Q8VCF1 403 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Mob2Q8VI63 235 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dio2Q9Z1Y9 266 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm17026K7N6Z0 213 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Per3O70361 1113 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Clk1P22518 483 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 FhP97807 507 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Smyd4Q8BTK5 799 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Isoc1Q91V64 297 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Lpin1Q91ZP3 924 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rtl8cQ9D6I0 112 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1023A2ASU6 311 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm10338K7N692 204 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cd163Q2VLH6 1121 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 1810049J17RikQ3V2G9 153 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Stoml2Q99JB2 353 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 GraspQ9JJA9 392 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 A0A286YDM2 672 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vmn1r184E9Q2N4 314 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tex16F6WNY1 1150 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 NmbrO54799 390 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ifngr1P15261 477 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rab5bP61021 215 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm11992Q5SS90 291 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Eif2dQ61211 570 aaKnown RBP16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr630Q9EQQ7 319 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fbxw5Q9QXW2 573 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dnajb9Q9QYI6 222 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Avpr1bQ9WU02 421 aa16.15■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr519K7N645 319 aa16.14■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc10a3P21129 473 aa16.14■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Lrfn1Q2WF71 766 aa16.14■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Prrg2Q8R182 198 aa16.14■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr385Q8VGT1 312 aa16.14■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc32a1O35633 525 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rnf43Q5NCP0 784 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ccdc36Q6PDM4 574 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Abhd13Q80UX8 337 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Pced1bQ8BGX1 433 aaKnown RBP16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr394Q8VGR5 310 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 HckP08103 524 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Hp1bp3Q3TEA8 554 aaKnown RBP16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slco6c1Q8C0X7 706 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tex29Q9DA77 186 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nsg2P47759 171 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 AnpepP97449 966 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Akt2Q60823 481 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 N6amt1Q6SKR2 214 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms