RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 St14P56677 855 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nos3P70313 1202 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Bcl2a1bQ497M6 172 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc26a10Q5EBI0 492 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr464Q5SW48 313 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Fbxo42Q6PDJ6 717 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Sult1c1Q80VR3 304 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cst13Q80ZN5 141 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Smoc1Q8BLY1 463 aaKnown RBP9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Plcz1Q8K4D7 647 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ppp1r8Q8R3G1 351 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ogfrl1Q8VE52 464 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dok4Q99KE3 325 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cmss1Q9CZT6 276 aaKnown RBP9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ubr1O70481 1757 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tp63O88898 680 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 InhbcP55104 352 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 WasP70315 520 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Fpr-rs6Q3SXG2 339 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ces2aQ8QZR3 558 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1325Q8VF43 315 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ppp2r2dQ925E7 453 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 AadacQ99PG0 398 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vsig1Q9D2J4 407 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nme4Q9WV84 186 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp4a32A2A8T1 509 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm14692A2BH01 229 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Prss56F2YMG0 604 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 PigaQ64323 485 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ttc29Q80VM3 471 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Faim2Q8K097 317 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cst14Q8VII3 130 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Desi1Q9CQT7 168 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 PclafQ9CQX4 110 aaKnown RBP9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr630Q9EQQ7 319 aa9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Eif4hQ9WUK2 248 aaKnown RBP9.88□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Spaca5A2AE20 160 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1153A2AVC0 318 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Sh3yl1O08641 340 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Defa14P50712 85 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ikzf2P81183 526 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Kcnj8P97794 424 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ndrg1Q62433 394 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Prdx6bQ8BG37 224 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gprc5aQ8BHL4 356 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr348Q8VGK3 313 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 S1pr4Q9Z0L1 386 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Chd1P40201 1711 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 2610001J05RikF2Z3Y9 59 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pabpc4lG5E8X2 370 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr519K7N645 319 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Neu1O35657 409 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gh1P06880 216 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Apoa2P09813 102 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Agtr1aP29754 359 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 TekQ02858 1122 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mocs1Q5RKZ7 636 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 OclnQ61146 521 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ugt2a2Q6PDD0 528 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Svs1Q6WIZ7 820 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dsg1cQ7TSF0 911 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cdkl3Q8BLF2 595 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc15a3Q8BPX9 578 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Smad3Q8BUN5 425 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Marc1Q9CW42 340 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 3300002I08RikQ9CXH3 147 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Capns2Q9D7J7 247 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tm9sf3Q9ET30 587 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp2g1Q9WV19 494 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Uba2Q9Z1F9 638 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rhox2dW4VSN9 191 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Myh7bA2AQP0 1941 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp4a30bA0A087WS15 508 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gm42688A0A0R3P9D1 673 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gtpbp1O08582 668 aaKnown RBP9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cbx2P30658 519 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Csf3rP40223 837 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rab5bP61021 215 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ap5b1Q3TAP4 876 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mrgprb1Q3UG61 350 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Bod1Q5SQY2 173 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Dnajc15Q78YY6 149 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1288Q7TQY0 312 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tmem221Q8K071 230 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mfsd2aQ9DA75 534 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc38a3Q9DCP2 505 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr703Q9EPF5 319 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 AldoaP05064 364 aaKnown RBP9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Kcnj9P48543 393 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Drd4P51436 387 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Klhl8P59280 629 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ermp1Q3UVK0 898 aaKnown RBP9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Q8BHG2 160 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc26a9Q8BU91 790 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn1r203Q8R273 311 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Pycr2Q922Q4 320 aaKnown RBP9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nrif1Q923B3 828 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 SgshQ9EQ08 502 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Oxct2bQ9ESL0 520 aa9.87□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Oxct2aQ9JJN4 520 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms