RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ACADLP28330 430 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 HPCAL1P37235 193 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 TAP2Q03519 686 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 PMS2P3Q13401 168 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 GPM6BQ13491 265 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 SLBPQ14493 270 aaKnown RBP eCLIP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 NFE2L1Q14494 772 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 THAP5Q7Z6K1 395 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 UBE2Q1Q7Z7E8 422 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 LAS2Q8IYD9 372 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 TERB1Q8NA31 727 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 OR2L2Q8NH16 312 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 PNPT1Q8TCS8 783 aaKnown RBP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 FGF13Q92913 245 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 COQ8BQ96D53 544 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 DPH2Q9BQC3 489 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 LTB4R2Q9NPC1 389 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 VNN3Q9NY84 501 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 U3KQV3 271 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 ANTXRLA6NF34 631 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 PCDH7O60245 1069 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 KDELR2P33947 212 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 PIGAP37287 484 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 C16orf72Q14CZ0 275 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 GALNT18Q6P9A2 607 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 CHST15Q7LFX5 561 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 C11orf96Q7Z7L8 435 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 GALNT10Q86SR1 603 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 C8orf59Q8N0T1 100 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF555Q8NEP9 628 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 EFCAB11Q9BUY7 163 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 ZDHHC5Q9C0B5 715 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 ING2Q9H160 280 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 DPEP2Q9H4A9 486 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 ZDHHC4Q9NPG8 344 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 ITM2CQ9NQX7 267 aa16.44■□□□□ 0.22
PHGDH-211ENST00000641213 EXO1Q9UQ84 846 aaKnown RBP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 PCYT1BQ9Y5K3 369 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-211ENST00000641213 C1orf226A1L170 272 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 PIPSLA2A3N6 862 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 FOXE1O00358 373 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-211ENST00000641213 B4GAT1O43505 415 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 VEGFDO43915 354 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 HS6ST1O60243 411 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 CA3P07451 260 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 P2RY2P41231 377 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 KCNAB2Q13303 367 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 ANXA8L1Q5VT79 327 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 FAM83HQ6ZRV2 1179 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-211ENST00000641213 KCTD8Q6ZWB6 473 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 HIPK1Q86Z02 1210 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 CLVS1Q8IUQ0 354 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-211ENST00000641213 ERI1Q8IV48 349 aaKnown RBP16.43■□□□□ 0.22
PHGDH-211ENST00000641213 C7orf61Q8IZ16 206 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 PLA2G15Q8NCC3 412 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 VPS37AQ8NEZ2 397 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 EHD1Q9H4M9 534 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 IL1RAPQ9NPH3 570 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 TMEFF2Q9UIK5 374 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-211ENST00000641213 ABCG2Q9UNQ0 655 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 TRANK1O15050 2925 aa16.43■□□□□ 0.22
PHGDH-211ENST00000641213 SEMG1P04279 462 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 FSHRP23945 695 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 IL12RB1P42701 662 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 MEF2AQ02078 507 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 TMEM259Q4ZIN3 620 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 PAGE2BQ5JRK9 111 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SYNPOQ8N3V7 929 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 CXorf40AQ8TE69 158 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SLC5A11Q8WWX8 675 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SUSD6Q92537 303 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SNX19Q92543 992 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 TBC1D20Q96BZ9 403 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 CHST8Q9H2A9 424 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 OR52A5Q9H2C5 316 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SPNS1Q9H2V7 528 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 POLR1BQ9H9Y6 1135 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 LIN28AQ9H9Z2 209 aaKnown RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 DMRT3Q9NQL9 472 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SIRT5Q9NXA8 310 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 RPS6KA6Q9UK32 745 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 FZD4Q9ULV1 537 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 TMEM98Q9Y2Y6 226 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 PRKAB1Q9Y478 270 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 PCDHGA8Q9Y5G5 932 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 TBC1D3BA6NDS4 549 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 CTBSQ01459 385 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 RAB39AQ14964 217 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 HIST2H2ACQ16777 129 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF385BQ569K4 471 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 C10orf62Q5T681 223 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 HIST2H2AA3Q6FI13 130 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SHQ1Q6PI26 577 aaKnown RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 NXPE4Q6UWF7 544 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 ARMCX6Q7L4S7 300 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 DCP2Q8IU60 420 aaKnown RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 CPA6Q8N4T0 437 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 ARL10Q8N8L6 244 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms