RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CBX4O00257 560 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 GFRA2O00451 464 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 CTDSP2O14595 271 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 SSX4O60224 188 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 SEMA3DO95025 777 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 CBSLP0DN79 551 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 AMD1P17707 334 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 GABRB1P18505 474 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 CBSP35520 551 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 NUDT6P53370 316 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 TWF1Q12792 350 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 ZNF177Q13360 481 aaPredicted RBP14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 TEAD4Q15561 434 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 NOXRED1Q6NXP6 359 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 MACC1Q6ZN28 852 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 VN1R5Q7Z5H4 357 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 OR8J2Q8NGG1 315 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 LKAAEAR1Q8TD35 194 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 APOLD1Q96LR9 279 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 ASB8Q9H765 288 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 SMURF1Q9HCE7 757 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 DUSP12Q9UNI6 340 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 PCDHB11Q9Y5F2 797 aa14.32□□□□□ -0.12
CACNA1A-220ENST00000635988 MPZL2O60487 215 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 KCNQ1P51787 676 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 NXNL2Q5VZ03 156 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 SYT12Q8IV01 421 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 GPR152Q8TDT2 470 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 APIPQ96GX9 242 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 EGLN2Q96KS0 407 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 KCNS3Q9BQ31 491 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 BOCQ9BWV1 1114 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 TPT1P8Q9HAU6 139 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 SNX8Q9Y5X2 465 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 KCNE1BA0A087WTH5 132 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 SCN2BO60939 215 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 YES1P07947 543 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 CHRNB1P11230 501 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 EPORP19235 508 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 CD52P31358 61 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 MGAT3Q09327 533 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 DSC3Q14574 896 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 PTPRRQ15256 657 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 CCL15Q16663 113 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 HKDC1Q2TB90 917 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 FAM151BQ6UXP7 276 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 GDPGP1Q6ZNW5 385 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 SLC5A8Q8N695 610 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 L3MBTL4Q8NA19 623 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 PSD4Q8NDX1 1056 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 FCRL1Q96LA6 429 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 DPH2Q9BQC3 489 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 TSEN34Q9BSV6 310 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 ZNF556Q9HAH1 456 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 ARL15Q9NXU5 204 aa14.31□□□□□ -0.12
CACNA1A-220ENST00000635988 GREB1Q4ZG55 1949 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ARHGAP33O14559 1287 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 COX7A2P14406 83 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 PRKCAP17252 672 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 PCGF2P35227 344 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 RPIAP49247 311 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 WNT3P56703 355 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CYP4F2P78329 520 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ZNF33BQ06732 778 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 NFATC2Q13469 925 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 E2F2Q14209 437 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 DMC1Q14565 340 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 TSTQ16762 297 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 TBRG1Q3YBR2 411 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CLDN19Q8N6F1 224 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ATAD1Q8NBU5 361 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 UTP15Q8TED0 518 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ADAM2Q99965 735 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 HTATIP2Q9BUP3 242 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CCSER2Q9H7U1 834 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 MS4A12Q9NXJ0 267 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 KLHL42Q9P2K6 505 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 PCDHB9Q9Y5E1 797 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 MEIOCA2RUB1 952 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 TMEM189-UBE2V1I3L0A0 370 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 INPPL1O15357 1258 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 FZD6O60353 706 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CPSF4O95639 269 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ACRV1P26436 265 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 C21orf58P58505 322 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CDC42P60953 191 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 RPS24P62847 133 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 SELENOWP63302 87 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 BNC1Q01954 994 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 MED22Q15528 200 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 UGT8Q16880 541 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 MICAQ29983 383 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 PPP2R2DQ66LE6 453 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 TMPRSS11AQ6ZMR5 421 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CHST9Q7L1S5 443 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ATCAYQ86WG3 371 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 TRIM69Q86WT6 500 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 B3GNT7Q8NFL0 401 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms