RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SPNS1Q9H2V7 528 aa14.46□□□□□ -0.09
ACTN1-217ENST00000556203 PELI2Q9HAT8 420 aa14.46□□□□□ -0.09
ACTN1-217ENST00000556203 CDC14AQ9UNH5 594 aa14.46□□□□□ -0.09
ACTN1-217ENST00000556203 MRPS2Q9Y399 296 aaKnown RBP14.46□□□□□ -0.09
ACTN1-217ENST00000556203 A0A0A6YYC8 382 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 TRBC2A0A5B9 178 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ARGFXA6NJG6 315 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 I3L1I5 382 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 RIPK2O43353 540 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 FOXS1O43638 330 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 OR1F1O43749 312 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 KERAO60938 352 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 UMODP07911 640 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ABHD2P08910 425 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 FBLP22087 321 aaKnown RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 HSPA7P48741 367 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SERPINB9P50453 376 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SNRPNP63162 240 aaKnown RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 REEP5Q00765 189 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 CHAF1BQ13112 559 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ATP1A4Q13733 1029 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 NKG7Q16617 165 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 CPZQ66K79 652 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SHISA6Q6ZSJ9 500 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 CENPLQ8N0S6 344 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 TBC1D19Q8N5T2 526 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 PDPRQ8NCN5 879 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ZNF740Q8NDX6 193 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 DCAKDQ8WVC6 231 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SLC13A3Q8WWT9 602 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ESAMQ96AP7 390 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 TM4SF19Q96DZ7 209 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 MVB12AQ96EY5 273 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 MMABQ96EY8 250 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SPSB2Q99619 263 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 AIF1LQ9BQI0 150 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SARGQ9BW04 601 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 TXLNGYQ9BZA5 131 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 DRC3Q9H069 523 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 VPS11Q9H270 941 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 SOX17Q9H6I2 414 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 WDR54Q9H977 334 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 CNOT10Q9H9A5 744 aaKnown RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 NUDT4Q9NZJ9 180 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ZNF282Q9UDV7 671 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 ZNF180Q9UJW8 692 aa14.45□□□□□ -0.1
ACTN1-217ENST00000556203 PTBP2Q9UKA9 531 aaKnown RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 NXT1Q9UKK6 140 aaKnown RBP14.45□□□□□ -0.1
ACTN1-217ENST00000556203 EXOC1LA0A1B0GW35 172 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 VSTM2BA6NLU5 285 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 SUPT3HB4E1H0 165 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 UBXN8O00124 270 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 FFAR3O14843 346 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 GPR42O15529 346 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ZNF500O60304 480 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-217ENST00000556203 SUPT3HO75486 399 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 RFPL1O75677 317 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 STK16O75716 305 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 DNAJB5O75953 348 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 KRT38O76015 456 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 IPO13O94829 963 aaKnown RBP14.44□□□□□ -0.1
ACTN1-217ENST00000556203 VARSP26640 1264 aaKnown RBP14.44□□□□□ -0.1
ACTN1-217ENST00000556203 GGT5P36269 586 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 SCTRP47872 440 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 GLRBP48167 497 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 OCA2Q04671 838 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 CDC16Q13042 620 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 DSG2Q14126 1118 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 FAM53BQ14153 422 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 FAM83EQ2M2I3 478 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 TMEM214Q6NUQ4 689 aaKnown RBP14.44□□□□□ -0.1
ACTN1-217ENST00000556203 MRGPREQ86SM8 312 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 APLFQ8IW19 511 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-217ENST00000556203 PRSS58Q8IYP2 241 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ZNF843Q8N446 348 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 SNX31Q8N9S9 440 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 KCT2Q8NC54 265 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ZCCHC10Q8TBK6 192 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ABHD17AQ96GS6 310 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ATOH8Q96SQ7 321 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 YIPF2Q9BWQ6 316 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 TRIM55Q9BYV6 548 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ING2Q9H160 280 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 ACSS2Q9NR19 701 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 DNAJC11Q9NVH1 559 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 TRPC4Q9UBN4 977 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 TUBD1Q9UJT1 453 aa14.44□□□□□ -0.1
ACTN1-217ENST00000556203 PRPF4O43172 522 aaKnown RBP eCLIP14.43□□□□□ -0.13e-7■■■■□ 23.9
ACTN1-217ENST00000556203 NDUFS4O43181 175 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 CCNT2O60583 730 aaKnown RBP14.43□□□□□ -0.1
ACTN1-217ENST00000556203 KLHL2O95198 593 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 SERPIND1P05546 499 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 SLC35G6P0C7Q6 338 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 MYBL2P10244 700 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 IL1RNP18510 177 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 GNAZP19086 355 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 CNTFP26441 200 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 MAGEA12P43365 314 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 AVPR1BP47901 424 aa14.43□□□□□ -0.1
ACTN1-217ENST00000556203 MAT1AQ00266 395 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms