RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ACSM2BQ68CK6 577 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 TNFAIP8L2Q6P589 184 aaPredicted RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 PAQR6Q6TCH4 344 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 SBSNQ6UWP8 590 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 CD300LGQ6UXG3 332 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF852Q6ZMS4 543 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 USP43Q70EL4 1123 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 CYP2U1Q7Z449 544 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 CCDC71Q8IV32 467 aaPredicted RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 CYP4Z2PQ8N1L4 340 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 MFSD4AQ8N468 514 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 IQCF1Q8N6M8 205 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 TP53I13Q8NBR0 393 aaPredicted RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 SUSD3Q96L08 255 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF382Q96SR6 550 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 DOK1Q99704 481 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 NRTNQ99748 197 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 BEX1Q9HBH7 125 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 NLE1Q9NVX2 485 aaPredicted RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 TMCC2O75069 709 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 PEPDP12955 493 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 PAX3P23760 479 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 PRKAG1P54619 331 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 PTPN5P54829 565 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 ALDH6A1Q02252 535 aaKnown RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 GALNT1Q10472 559 aaPredicted RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 NAE1Q13564 534 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 MANEALQ5VSG8 457 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 COLGALT2Q8IYK4 626 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 LEMD2Q8NC56 503 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 NACC2Q96BF6 587 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF486Q96H40 463 aaPredicted RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 TUBA1CQ9BQE3 449 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 CFHR5Q9BXR6 569 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 RMND5AQ9H871 391 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 WBP11Q9Y2W2 641 aaKnown RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 MYLKQ15746 1914 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 SOBPA7XYQ1 873 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CENPXA8MT69 81 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF701M0R085 212 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 TNFRSF10BO14763 440 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SUV39H1O43463 412 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PCDH7O60245 1069 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PCMT1P22061 227 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ATP5C1P36542 298 aaKnown RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SLC26A3P40879 764 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PIK3CBP42338 1070 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF140P52738 457 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 LBX1P52954 281 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 FAM171BQ6P995 826 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SYCE2Q6PIF2 218 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 FAM131AQ6UXB0 335 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 DEF8Q6ZN54 512 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 GDPD3Q7L5L3 318 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 VRK3Q8IV63 474 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 NAGSQ8N159 534 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 DOK4Q8TEW6 326 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PPP1R14BQ96C90 147 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 EMILIN2Q9BXX0 1053 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ITPAQ9BY32 194 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 FBXO44Q9H4M3 255 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ZDHHC6Q9H6R6 413 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF556Q9HAH1 456 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 MRM3Q9HC36 420 aaKnown RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 COMMD3Q9UBI1 195 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 MAGEB17A8MXT2 336 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 M0QX08 132 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CACNG3O60359 315 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CLDN9O95484 217 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 TGFB1P01137 390 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 KLKB1P03952 638 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 GSTM1P09488 218 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CSF2RAP15509 400 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ITGALP20701 1170 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 HOXD9P28356 352 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CHI3L1P36222 383 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PPP5CP53041 499 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 GRSF1Q12849 480 aaKnown RBP eCLIP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SLAMF1Q13291 335 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 MAD2L1BPQ15013 274 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 TAF1AQ15573 450 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 LIPKQ5VXJ0 399 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 KIAA1614Q5VZ46 1190 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PTCHD4Q6ZW05 846 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 RHOXF1Q8NHV9 184 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 KAT2AQ92830 837 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 RAB8BQ92930 207 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 RELTQ969Z4 430 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 TSPAN18Q96SJ8 248 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SORBS1Q9BX66 1292 aaKnown RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 ARNT2Q9HBZ2 717 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 PAK6Q9NQU5 681 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 KIAA1522Q9P206 1035 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-202ENST00000546378 UPK1BO75841 260 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 SDC1P18827 310 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 INPP1P49441 399 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 DEFA1P59665 94 aa14.17□□□□□ -0.14
HOXC11-202ENST00000546378 DEFA3P59666 94 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms