RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 C6orf47O95873 294 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 HSD3B1P14060 373 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF12P17014 697 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 HSD3B2P26439 372 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SPINT3P49223 89 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SRP54P61011 504 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 MS4A2Q01362 244 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 TRIM71Q2Q1W2 868 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 NDUFAF6Q330K2 333 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 CYBRD1Q53TN4 286 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 LCN8Q6JVE9 175 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 PIANPQ8IYJ0 282 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 COX18Q8N8Q8 333 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 SLC39A13Q96H72 371 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 RAD9AQ99638 391 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 REEP4Q9H6H4 257 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 FBXL12Q9NXK8 326 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 MRTO4Q9UKD2 239 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 RPL36Q9Y3U8 105 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 PRKAB1Q9Y478 270 aa14.84□□□□□ -0.03
PCDHA3-202ENST00000532566 H0YAE9 185 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 JUNP05412 331 aaKnown RBP14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 H1F0P07305 194 aaKnown RBP14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 JUPP14923 745 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 RYKP34925 604 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 INHBCP55103 352 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 KCNAB2Q13303 367 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 MEP1AQ16819 746 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 ZSWIM7Q19AV6 140 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF776Q68DI1 518 aaPredicted RBP14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 TRMT61BQ9BVS5 477 aaKnown RBP14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 SLC2A11Q9BYW1 496 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 C20orf27Q9GZN8 174 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 CMTM6Q9NX76 183 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 EURLQ9NYK6 297 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 GJD2Q9UKL4 321 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 COQ6Q9Y2Z9 468 aa14.83□□□□□ -0.03
PCDHA3-202ENST00000532566 HOXD8P13378 290 aaPredicted RBP14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 SLC6A4P31645 630 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 STAT5AP42229 794 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 PPP2R2DQ66LE6 453 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 CADM2Q8N3J6 435 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 MUS81Q96NY9 551 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 KCNK6Q9Y257 313 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 MAN2B2Q9Y2E5 1009 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 PCDHGA7Q9Y5G6 932 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 RIIAD1A6NNX1 92 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 ABCB7O75027 752 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 KCNA5P22460 613 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 BNIP3Q12983 259 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 PCBP2Q15366 365 aaKnown RBP eCLIP14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 VMACQ2NL98 169 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 UXS1Q8NBZ7 420 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF248Q8NDW4 579 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 MZB1Q8WU39 189 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 YIPF4Q9BSR8 244 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 IL26Q9NPH9 171 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 SPATA2Q9UM82 520 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 WBP11Q9Y2W2 641 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 EIF3FO00303 357 aaPredicted RBP14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 DENRO43583 198 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 SCN2BO60939 215 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 ADAMTS4O75173 837 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 RASAL1O95294 804 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 XKP51811 444 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 TMC8Q8IU68 726 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 ANKFN1Q8N957 763 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 KAT2AQ92830 837 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 ART5Q96L15 291 aa14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 POLR2J2Q9GZM3 115 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-202ENST00000532566 TGM5O43548 720 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 PABPC4LP0CB38 370 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SYN1P17600 705 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 APLP1P51693 650 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 CLDN8P56748 225 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 LAPTM4AQ15012 233 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ATG14Q6ZNE5 492 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ERN2Q76MJ5 926 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF563Q8TA94 476 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 TRIM63Q969Q1 353 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 C12orf43Q96C57 262 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 IL4I1Q96RQ9 567 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 TFECO14948 347 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 NDUFS4O43181 175 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 HNRNPA1P09651 372 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 C1GALT1C1LP0DN25 315 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SRCP12931 536 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF8P17098 575 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SEMA3BQ13214 749 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 DOC2AQ14183 400 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 ALG11Q2TAA5 492 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 KLHL22Q53GT1 634 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 CRTC1Q6UUV9 634 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 DIRAS2Q96HU8 199 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 CNOT11Q9UKZ1 510 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 SNX7Q9UNH6 387 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 N6AMT1Q9Y5N5 214 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 LINGO3P0C6S8 592 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 PRKAR1AP10644 381 aa14.82□□□□□ -0.04
PCDHA3-202ENST00000532566 RPS3P23396 243 aaKnown RBP eCLIP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms