RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SPATA4Q8NEY3 305 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 HMGCLL1Q8TB92 370 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 CT55Q8WUE5 264 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 SKA2Q8WVK7 121 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 KCNJ9Q92806 393 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 INPP5DQ92835 1189 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 SNF8Q96H20 258 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 C16orf45Q96MC5 204 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 LRFN5Q96NI6 719 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 RUFY1Q96T51 708 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 GPR21Q99679 349 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 FAM167BQ9BTA0 163 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 NAT9Q9BTE0 207 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 AARSD1Q9BTE6 412 aaKnown RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 KRTAP9-9Q9BYP9 154 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 KRTAP9-4Q9BYQ2 154 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 TRIM31Q9BZY9 425 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 KLHL20Q9Y2M5 609 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 SNX24Q9Y343 169 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 DHRS7Q9Y394 339 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 COPG1Q9Y678 874 aaKnown RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 COMMD10Q9Y6G5 202 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 CNTRLQ7Z7A1 2325 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 HCFC1P51610 2035 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 PCM1Q15154 2024 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 A0A1W2PPV9 198 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 ARHGEF33A8MVX0 844 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 E7ESA3 106 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 GFYI3L273 518 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 RAD51CO43502 376 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CAPN1P07384 714 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 MPC1LP0DKB6 136 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 ERGP11308 486 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 MAGP20916 626 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CASQ1P31415 396 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 ADH7P40394 386 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CCNFP41002 786 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 KIR3DL1P43629 444 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CARSP49589 748 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 DNASE1L3Q13609 305 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CUL1Q13616 776 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 FASTKQ14296 549 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 HIF1AQ16665 826 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CYP2A13Q16696 494 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 DEFB110Q30KQ9 67 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 RBM20Q5T481 1227 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 TEDDM1Q5T9Z0 273 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 STEAP4Q687X5 459 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 FCRL6Q6DN72 434 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 TTC23LQ6PF05 361 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 TRMT10BQ6PF06 316 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CLEC9AQ6UXN8 241 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 NEK10Q6ZWH5 1172 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 GALNT7Q86SF2 657 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 MRGPRGQ86SM5 289 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 TAX1BP1Q86VP1 789 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 DSELQ8IZU8 1212 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 FBXO15Q8NCQ5 510 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 OR2A1Q8NGT9 310 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 OR9A1PQ8NGU1 263 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 DNAJB8Q8NHS0 232 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 GSDMBQ8TAX9 411 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CD200R1Q8TD46 325 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 MAGEC3Q8TD91 643 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 THAP4Q8WY91 577 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 SLC22A18Q96BI1 424 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 LRRC39Q96DD0 335 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CERS2Q96G23 380 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 FOPNLQ96NB1 174 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 SMAD5Q99717 465 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 ERP44Q9BS26 406 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 NUDT9Q9BW91 350 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 RAB11FIP5Q9BXF6 653 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 SPRTNQ9H040 489 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 RASSF4Q9H2L5 321 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 FANCEQ9HB96 536 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 NEUROD4Q9HD90 331 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 ACSS2Q9NR19 701 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 PCMTD2Q9NV79 361 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 SLC17A6Q9P2U8 582 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 TNFRSF10DQ9UBN6 386 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 ZC3H7BQ9UGR2 993 aaKnown RBP8.09□□□□□ -1.11
SSBP3-212ENST00000528930 SERTAD3Q9UJW9 196 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 SLC39A10Q9ULF5 831 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 CHMP2BQ9UQN3 213 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 B3GNT3Q9Y2A9 372 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 MRFAP1Q9Y605 127 aa8.09□□□□□ -1.11
SSBP3-212ENST00000528930 PKD1L1Q8TDX9 2849 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 RNF212BA8MTL3 300 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 C21orf140B9A014 251 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 E7EQ34 232 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 MYO1CO00159 1063 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF749O43361 778 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 KATNA1O75449 491 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 EDN3P14138 238 aa8.08□□□□□ -1.12
SSBP3-212ENST00000528930 CYP2A7P20853 494 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms