RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 PAX3P23760 479 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 CALCRP30988 508 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 APOBEC1P41238 236 aaKnown RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 MTNR1AP48039 350 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 CSNK1DP48730 415 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SLC26A2P50443 739 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SUMO3P55854 103 aaPredicted RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 EVA1CP58658 441 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 STRN3Q13033 797 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 PRKG2Q13237 762 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 MAD2L1Q13257 205 aaPredicted RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 FAM50AQ14320 339 aaKnown RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 IL13RA2Q14627 380 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 PCBP2Q15366 365 aaKnown RBP eCLIP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 C2orf68Q2NKX9 166 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 AP5B1Q2VPB7 878 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SGO1Q5FBB7 561 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 PAGE2BQ5JRK9 111 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 PAPD4Q6PIY7 484 aaKnown RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 MSANTD1Q6ZTZ1 278 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SND1Q7KZF4 910 aaKnown RBP eCLIP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SBSPONQ8IVN8 264 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 CCDC28AQ8IWP9 274 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 PRR18Q8N4B5 295 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 DUSP18Q8NEJ0 188 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 OR51G1Q8NGK1 321 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SYNPRQ8TBG9 265 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 NABP1Q96AH0 204 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF625Q96I27 306 aaPredicted RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 FAM210BQ96KR6 192 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 CEP170P1Q96L14 293 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SIN3AQ96ST3 1273 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 PITX2Q99697 317 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 MYD88Q99836 296 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 COLEC11Q9BWP8 271 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 CPVLQ9H3G5 476 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 EHD1Q9H4M9 534 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SP140LQ9H930 580 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SH2D2AQ9NP31 389 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 P4HTMQ9NXG6 502 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 DPP3Q9NY33 737 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 RBAKQ9NYW8 714 aaPredicted RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 APOBEC3BQ9UH17 382 aaKnown RBP-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF225Q9UK10 706 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SPATA2Q9UM82 520 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF148Q9UQR1 794 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 CNPY2Q9Y2B0 182 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 DTNAQ9Y4J8 743 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 ETV7Q9Y603 341 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 BRWD1Q9NSI6 2320 aa-1.58□□□□□ -2.66
SNORA40.16-201ENST00000517238 SCN2AQ99250 2005 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 A0A088AWK7 358 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 TEX48A0A1B0GUV7 120 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 IQCMA0A1B0GVH7 501 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 FOXI3A8MTJ6 420 aaPredicted RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 C11orf94C9JXX5 98 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 E2F3O00716 465 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 DHHO43323 396 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 PLEKP08567 350 aaPredicted RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 IGHV4-31P0DP07 118 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 ACP2P11117 423 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 DLSTP36957 453 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 CTRLP40313 264 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 ALDH18A1P54886 795 aaKnown RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 NUP107P57740 925 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 RPS11P62280 158 aaKnown RBP eCLIP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 FAM193AP78312 1265 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 IRX3P78415 501 aaPredicted RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 TMEM132DQ14C87 1099 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 CD226Q15762 336 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 CCDC57Q2TAC2 916 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 QRICH1Q2TAL8 776 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 PDLIM3Q53GG5 364 aaPredicted RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 RAB6CQ53S08 254 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 RFWD3Q6PCD5 774 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 Q6ZR03 302 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 KIAA1328Q86T90 577 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 ARHGAP12Q8IWW6 846 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 SLC35F3Q8IY50 421 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 KIAA2013Q8IYS2 634 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 FAM71E2Q8N5Q1 922 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 MIR7-3HGQ8N6C7 128 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 SUMF2Q8NBJ7 301 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 SETD9Q8NE22 299 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF563Q8TA94 476 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 MORC4Q8TE76 937 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 SREK1Q8WXA9 508 aaKnown RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 DCUN1D4Q92564 292 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 APBB2Q92870 758 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 RBM17Q96I25 401 aaKnown RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 MBOAT4Q96T53 435 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 CGRRF1Q99675 332 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 NUF2Q9BZD4 464 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 RAB6CQ9H0N0 254 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 OR51J1Q9H342 316 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 IL1RAPQ9NPH3 570 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 MMP26Q9NRE1 261 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 BEX4Q9NWD9 120 aaPredicted RBP-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 SIRPGQ9P1W8 387 aa-1.59□□□□□ -2.66
SNORA40.16-201ENST00000517238 UBQLN2Q9UHD9 624 aa-1.59□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms